KEGG   Cyprinus carpio (common carp): 109112717
Entry
109112717         CDS       T05134                                 
Symbol
lnx1
Name
(RefSeq) E3 ubiquitin-protein ligase LNX isoform X1
  KO
K10692  ligand of Numb protein X 1/2 [EC:2.3.2.27]
Organism
ccar  Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccar04121]
    109112717 (lnx1)
Enzymes [BR:ccar01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     109112717 (lnx1)
Ubiquitin system [BR:ccar04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Ligand of Numb proteins
    109112717 (lnx1)
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 zf-RING_UBOX zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-RING_5 zf-C3HC4_4 U-box TRAF3_RING
Other DBs
NCBI-GeneID: 109112717
NCBI-ProteinID: XP_018981170
Position
39:complement(7899692..7941629)
AA seq 761 aa
MSDQDEAVCGATGVSPTSPPPDLCHVCGQRHLQEENHEYTYKEEVDDDLMCHICLQPLIL
PVDTPCGHTYCQECLTNFLLESDFCPVDRTPLMLQTCRKSSLLVHKLLDKLMVSCPFTDH
CTEVMPRGEMEGHIRSRCKGASHYGLSAERKRRSQEEDCTDSTSELTVAALPGEGCPSSA
IALLSDEPGLVNPAYEPSVEDNSQSGSTTSLAARSGSRKSEYRNFDRTSVRSRSFRRLNR
AFSVLRRTKSGTAVANETTEELDNLRNANIPPEVFALPQLHHLIPDGEVTSIKITRADPC
EPLAISTVGGNETPLVRILIQDIYREGIIARDGRLLPGDMILKVNGIDISNVPHCYAVAS
LKQPCTLLRLTVLREQHHRYHFHHHSPTEAFPTHTPTIRDDSLHVVLVKRAPDEQLGIKL
VRRPDEHGIFIFHLLEGGLAARDGRLRVDDRVLAINGHDLRYGAPEHAALLIQASEDRVH
FIVSRQTHIPTPDILQEAPWNMEGPPPYSPVDIEHTLLDSCQKPACYEKTVTLLKEPHDS
LGMTVAGGMSSRGWDLPVYVTNVDPNGVVGKEGSIRKGDILLNVNGVDLTGVTRSEAVAN
LKNTSSPVVLRVLEMRPPNESSLDCMPSLHSPCALLPSSPGDIKLPPSNDDYSPFWVSWL
QLPRHLYCCKDIVLRRSTSGSLGFSIVGGQEEINCNQSFFIRSIVEGTPAYNDGRIRCGD
ILLEVNGKSTWGMTHTALVRLLKELRGRITLTIVSWPGSLL
NT seq 2286 nt   +upstreamnt  +downstreamnt
atgagtgatcaggatgaggcggtttgtggtgcaacaggagtcagtcccacctcccctccc
cctgacctatgccatgtctgtggacaacgacacctacaggaggagaaccacgaatatact
tacaaagaggaggtggatgatgaccttatgtgccacatctgccttcagcctttgatcctg
cccgtggacaccccctgcggacatacctattgccaggagtgtctgacaaacttcctgttg
gagagcgacttctgcccggtggaccgcactccactgatgcttcagacctgccggaagtcc
agcctgctggtgcacaagctgctggataaactgatggtatcctgcccctttactgaccac
tgcactgaagtgatgccgcggggagaaatggaaggacacatcaggagccggtgtaaagga
gcatcacactatgggctctccgcagagagaaagcggcgctctcaggaggaagactgcaca
gacagcacctcagagctcactgtggcagcactgcccggggagggatgcccctcctctgct
atcgccctcctatcagacgagcccggcctggttaaccccgcctatgagcccagtgtggaa
gataacagccaatctgggagcaccaccagcctggcagcacgcagcggttcgaggaagagt
gagtatcgcaactttgacagaacgtcagtgcgtagtcgctcttttcgccgcctgaatcga
gccttcagtgtcctgaggagaaccaagagtgggacagccgtggccaatgagaccacagag
gagctagacaacctcagaaatgccaacataccacctgaggtatttgcattacctcagctg
catcatctaatccctgatggtgaagtcaccagtataaagatcacaagggcagatccttgt
gaaccactggctattagcactgttggtggcaatgagacacctttggttcgcatcctcatt
caggacatctacagagagggcatcatcgctcgggatggaagactgctacctggagatatg
atcctcaaggtgaatggtatagacatcagtaatgtgcctcactgttatgctgtggcgtct
ctgaagcagccctgcacactgctgcggttgaccgtactgcgagagcagcaccaccgttac
catttccatcatcactctcccaccgaggccttccccacccacacccccaccatccgggat
gacagcctgcatgtggtccttgttaagagggctccagatgaacagctgggcatcaagctg
gtgcgcaggcctgatgagcatggcatttttatcttccacctgctggagggagggctggcc
gcccgtgacgggaggctgagagtagacgaccgcgttctggccatcaatggccacgacctg
agatatggcgctcccgagcatgctgcgctgcttattcaggcgagcgaggaccgcgtccac
ttcattgtgtcccgccaaactcacatccctactccagacatcctacaggaagcgccctgg
aacatggaaggaccaccgccctactcgcctgtggatattgagcacactttactggattca
tgccaaaagcctgcatgttacgagaagacagtgactctgctgaaggagccgcatgattct
ctcggcatgacagttgcaggtgggatgagcagcaggggatgggatctgcccgtctacgtc
accaacgtcgacccaaatggagtggtgggaaaagaaggctcgatccgcaaaggtgacatc
cttctaaacgtgaatggggttgacctgacaggtgtgactcggagcgaggctgtggctaac
ctgaagaacacctcatccccggtggtcctgcgggtactagaaatgagacccccaaatgag
agctccctggactgcatgccatccctgcattccccctgcgctctcttgccctcttcacct
ggagacatcaaacttcccccctctaatgatgactactcgcccttctgggtgtcctggctc
cagctgcccagacatctatactgctgtaaagacattgtcctccgcaggagcacatctggc
agtctgggtttcagtattgtgggtggacaagaagaaatcaactgtaaccagtctttcttc
atccgctctatcgtagagggcacaccggcctacaacgatggcaggatacgttgtggagac
atcctgctggaggtgaacgggaagagcacttggggaatgacacacacggctctggtccgc
ctgctcaaggagctgaggggtcggatcactctcaccatcgtttcttggcccggcagcctg
ctttag

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