KEGG   Clostridium cellulovorans: Clocel_1794
Entry
Clocel_1794       CDS       T01294                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
ccb  Clostridium cellulovorans
Pathway
ccb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ccb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Clocel_1794
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccb03019]
    Clocel_1794
   03016 Transfer RNA biogenesis [BR:ccb03016]
    Clocel_1794
Enzymes [BR:ccb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     Clocel_1794
Messenger RNA biogenesis [BR:ccb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Clocel_1794
Transfer RNA biogenesis [BR:ccb03016]
 Prokaryotic type
  tRNA degradation factors
   Clocel_1794
SSDB
Motif
Pfam: RNase_PH S1 PNPase RNase_PH_C KH_1 KH_2 DUF1773 EXOSC1
Other DBs
NCBI-ProteinID: ADL51538
UniProt: D9SKP2
Position
2168907..2171024
AA seq 705 aa
MNHILETTVAGRTLKVEFGKIGMLSNCAMLISYGDTVVMVNANASENPRDGIDFFPLSIE
YEERFYSVGKIPGGFIKREGRPSEKSILNARAIDRPIRPLFPKGYRNDVQVVCTVLSVEQ
DNLPNILAMNGASLGLLLSSIPFVDPVATVSVGLIDGNFVLNPTVEERKLSTMDLTICAT
RERVMMIEASGDEIPEEVMISAINYGFEQCQPIIKFQEEARSKFGKEKVTPTLYHVDETL
EKEVTEYSFEMLKEAMYITDKDQRNERLKVIKEDINSAFAEKYPDAKGDIGEVIYNTQKE
IVRDMMLNKKRRPDGRAFDEVRNIGCEVDLLPRTHGTGLFTRGLTQVLTVATLGAIGDVQ
IIDGLGEEESKRYMHHYNFPAYSVGEVKPLRGPGRREIGHGALAEKALVPLIPSEEEFPY
TIRLVSEVLSSNGSTSQASVCGSTLALLDAGVPIKRPAAGIAMGLITNEDLTQEGVLTDI
QGIEDFFGDMDFKVAGTTKGITAIQVDTKIKGLSDYVIRTAIEDARKARLHILEKIDECI
EKPREELSQYAPRIITMSIDPEKIRDVIGAGGKVINKIIAETGVKIDIKEDGKIFIMSAD
SVGANKAVKMIDDLTREIKVGEIYLGKVTKITTFGAFVEVLPNKEGLVHISKLDVTRVNK
VEDIVSVGDEILVKVTEIDNQGRVNLSRKDALADTEEKNKEDDEK
NT seq 2118 nt   +upstreamnt  +downstreamnt
atgaatcatattttagaaacaactgtagctggaagaacgctaaaagttgaatttggaaaa
attggtatgctatcaaattgtgcgatgcttatcagctatggcgatactgttgttatggta
aatgctaatgcatcagaaaaccctagggatggaatagactttttcccattaagtatcgaa
tatgaagaaagattttattcagtaggaaaaattccaggtggatttataaaaagggaaggt
cgtccttcagaaaaatctattttaaatgctagagctattgatagacctataagaccatta
ttcccaaaaggatatagaaacgatgttcaagttgtttgtactgtactttcagtagaacaa
gataatcttccaaatatcttagcaatgaatggagcttctttaggattattattatcaagt
attccatttgtagatccagttgctactgtatcagttggattaattgatgggaactttgta
ttaaatcctactgtagaagaaagaaaacttagcactatggacttaacaatttgtgccaca
agagaaagagttatgatgattgaagctagtggagatgaaatcccagaagaagtcatgata
agtgctataaattatggatttgagcaatgccaaccaataataaaatttcaagaggaagca
agaagcaagtttggtaaggaaaaagtaacaccaacgctttatcatgtagatgaaactctt
gaaaaagaagtaactgaatattcttttgaaatgttaaaagaggctatgtacataactgat
aaagatcagagaaatgaaagacttaaggttataaaagaagatattaatagtgcttttgct
gaaaaatatccagatgcaaaaggtgatattggtgaagtaatctacaatactcaaaaagaa
attgtaagagatatgatgcttaataagaaacgtagaccagacggtagagcctttgatgaa
gtaagaaatataggatgtgaagttgatttacttccaagaactcatggtacaggattattt
acaagaggtcttactcaagttttaactgtagcaactttaggtgcaattggtgatgttcaa
attatcgatggtttaggtgaagaagaatcaaagagatatatgcatcattataattttcct
gcatattctgttggagaagttaaaccgttaagaggaccaggaagaagagaaataggtcac
ggagctttagcagaaaaagcattagtaccgcttataccaagtgaagaagagttcccatat
acaattagattagtttcagaagtattaagttctaatggatcaacttctcaagcaagtgtt
tgtggaagtactctagctcttttagatgcaggtgttccaataaaaagaccagcagcagga
atagctatgggacttataactaatgaagatttaacccaagaaggtgttcttacagatatc
caaggtatagaagatttctttggagatatggatttcaaagttgcaggtactactaaaggt
atcacagcaattcaagttgatacaaagataaaaggtttatcagattatgtaattcgtaca
gcaattgaagatgcgagaaaagcaagacttcatattcttgaaaaaatcgatgaatgcatt
gagaaaccaagagaagaattatctcaatatgcaccaagaataataactatgtcgatagac
cctgaaaaaattcgtgatgtaataggtgcaggcggaaaagttataaataagataattgct
gaaactggcgtaaaaatagacataaaagaagatggcaagatatttataatgtcagcagac
agtgttggagcaaataaagctgttaagatgattgatgatttaacaagagaaataaaggtt
ggagaaatatacttaggaaaagttactaaaataactacctttggtgcttttgtagaagta
cttcctaataaagaaggtctcgttcatatatctaaattagatgttacgagagtaaataaa
gttgaagatatcgtatctgtaggtgatgagatacttgtaaaggttactgaaatagataac
caaggtagagtaaatctatcaagaaaagatgctttagctgatactgaagaaaaaaacaaa
gaagatgatgagaagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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