KEGG   Campylobacter coli RM1875: YSQ_06405
Entry
YSQ_06405         CDS       T03164                                 
Name
(GenBank) ribosomal pseudouridine synthase
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
ccf  Campylobacter coli RM1875
Brite
KEGG Orthology (KO) [BR:ccf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ccf03009]
    YSQ_06405
Enzymes [BR:ccf01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     YSQ_06405
Ribosome biogenesis [BR:ccf03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    YSQ_06405
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: AHK73590
Position
complement(1233058..1234023)
AA seq 321 aa
MQTFLVDEPSRLDIFLAKNLQQSRNQIASMIEKNCVWVNDKIQNKNSFKLKVGDKLVLNL
PLVEEAKPKFDIDFDIEILYEDEDLLVLNKPSNLVVHGAKSVKSATLVDWLIEKQYTLST
LGGEVRAGLVHRLDKETSGAILIAKNNFTHQKLSEQLSDKTMGRIYLALIDLPLKEDKII
IDKALIRSSANAIKKIVTNSFVKGSKEAKSAFVNLAKSEEVSLIGAKLFTGRTHQIRAHL
ASINRHILGDELYGYRGKYECRIMLHAYFLYFIHPRNGEKIFIQAPLMDDFKQILEKKFI
LGELNEKISLESLLGCFDSFI
NT seq 966 nt   +upstreamnt  +downstreamnt
atgcaaacttttttggttgatgaaccttcaaggctcgatatttttttagctaaaaatctt
cagcaaagtcgcaatcaaatagcctcgatgatagaaaaaaactgcgtttgggttaatgat
aaaattcaaaataaaaattcattcaagttaaaagtcggagataaacttgttttaaatttg
ccacttgtagaggaagctaagcctaaatttgatatagattttgatatagaaattttatac
gaagatgaggatttgttggttttaaataaaccttcaaatttggttgttcatggagcaaaa
agtgttaagagtgcgactttggtggattggcttatagaaaaacaatacaccctttctacc
ttaggcggagaagtgcgcgcagggcttgttcataggcttgataaggaaacaagcggagct
atattgatagcaaaaaataattttactcatcaaaagcttagtgagcagcttagtgataaa
actatgggaagaatttatcttgcgttaattgatttgccactaaaagaggataaaattatc
atagataaagctttgattcgatccagtgctaatgccattaaaaaaatagttacaaatagc
tttgttaagggttctaaggaggctaaaagtgcttttgttaacttggcaaaaagcgaggaa
gtgagtcttattggggctaagctttttacgggtagaacgcatcaaattagagcacattta
gctagcataaatcgtcatattttaggagatgaattatatggctatagggggaaatacgag
tgtaggattatgctgcatgcgtattttttgtatttcattcatcctagaaatggagaaaaa
atatttatccaagctccattaatggacgattttaaacaaattttagaaaaaaaatttatt
ttaggagagcttaatgaaaaaatttcacttgagtctttgcttgggtgctttgactctttt
atttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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