KEGG   Corynebacterium casei: CCASEI_05845
Entry
CCASEI_05845      CDS       T03041                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
ccg  Corynebacterium casei
Brite
KEGG Orthology (KO) [BR:ccg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccg03019]
    CCASEI_05845 (rnc)
   03009 Ribosome biogenesis [BR:ccg03009]
    CCASEI_05845 (rnc)
   03036 Chromosome and associated proteins [BR:ccg03036]
    CCASEI_05845 (rnc)
Enzymes [BR:ccg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     CCASEI_05845 (rnc)
Messenger RNA biogenesis [BR:ccg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CCASEI_05845 (rnc)
Ribosome biogenesis [BR:ccg03009]
 Eukaryotic type
  90S particles
   RNase
    CCASEI_05845 (rnc)
 Prokaryotic type
  rRNA processing factors
   CCASEI_05845 (rnc)
Chromosome and associated proteins [BR:ccg03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     CCASEI_05845 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Other DBs
NCBI-ProteinID: AHI19745
Position
1258733..1259467
AA seq 244 aa
MSRKKKISGEQALEEAYAAVDKAPLLKSLGVDINEHYLRLALTHRSFANEHGHLPNNERL
EFLGDAVLGLSIAARLYEKFPMRPESDISKMRASIVSRYGLSDVAREIGLGAYILLGKGE
HNSKGREKDSILSDTMEALFGAIYLQYEFETARGVILNLFAEKLEAAVSTSNHMDWKTTL
QELCAERKMPMPEYTATSTGPEHDQLFSAQVFVEGQLLGEGMGPNKKQAEQHAAEKASLI
IRVK
NT seq 735 nt   +upstreamnt  +downstreamnt
gtgagtaggaaaaagaagattagcggtgagcaggccttagaagaggcctacgccgcggtt
gataaggctccgctactcaagagcttgggtgtggatatcaacgagcactacctgcgcttg
gcattgacccaccgttctttcgcgaatgagcatgggcatctgccgaacaatgagcgcctt
gagttcctcggcgacgctgttctgggtttgtcgattgcagcccggctgtatgagaagttc
ccaatgcgccccgagtctgacatttcgaagatgcgcgcatccatcgtctcccgttatggg
ctttctgacgttgcgcgtgaaatcgggctcggtgcctacattttgctgggcaaaggtgag
cataactccaaggggcgtgagaaggattccatcctttcggacaccatggaggcgctgttt
ggcgctatctacctgcagtacgaatttgagactgcgcgtggcgtcattttgaacctcttt
gctgagaagctggaagctgctgtgtccaccagtaaccacatggactggaagaccaccctg
caggagctgtgcgcggagcgcaagatgccgatgccggagtacaccgccacatcgaccggt
cctgagcatgatcagttgttctccgctcaggtatttgtcgaagggcaattgctcggtgaa
ggcatgggcccaaacaagaagcaggctgagcagcatgctgctgaaaaggcttcgctgatc
attcgcgtgaagtag

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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