KEGG T00290: Cag

Chlorobium chlorochromatii: Cag_0847

Entry

Cag_0847 CDS T00290

Definition

helicase RecD/TraA (EC:3.1.11.5)

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

cch Chlorobium chlorochromatii

Pathway

cch03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:cch03440]

SSDB

Motif

Pfam:

AAA_30 HHH_4 UvrD_C_2 AAA_19 AAA_11 Viral_helicase1 HHH_5 Helicase_RecD PIF1 DUF258 AAA_28 NTPase_1 T2SE AAA_29 AAA_22 AAA_16 HHH_2 PhoH NACHT AAA_23 AAA_25 DUF2075 ArgK MobB AAA_10 DEAD FtsK_SpoIIIE cobW AAA ABC_tran AAA_5 AAA_14 UvrD_C Arch_ATPase AAA_17 CbiA ATP_bind_1 ABC_ATPase TrwB_AAD_bind ATP-synt_ab AAA_24 UvrD-helicase AAA_18 SMC_N

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(1177760..1179976)

AA seq 738 aa
MSVQDGQESYYYSPKERLSGAVERVTFHSQKNGFSVLRIKVKGRRDLVTVVGATPSIAPG
EFVECLGEWHNDSTYGLQFRATELTVVPPETIDGIEKYLASGMVKGIGPHFAKTLVYAFR
EDVFTVIEEEPERLLELPGIGQKRMEMVTSAWADQKVIRDIMVFLQSHGLGTSRAVRIFK
TYGNESILRVKENPYRLVLDIYGVGFKTADALAMQLGIAPDSLIRAQAGVHHVLQEIASS
GHCAAPREQLVAEASRLLSIPEERTHEAIDAELRAGNLVREELRGVETLYLLSLHRAELG
VATSLMRLLEGEIPWRHLAIEEALPWVEAQNNITLSPSQKEALHTALTNKVTVITGGPGV
GKTTLVKSILLILQAQKVRVALCAPTGRAAKRLSESTGLEAKTIHRLLEFDPLTGGFKHQ
RDNPLECDLVVVDESSMVDVVLMNRLLAAVPEKAALLLIGDVDQLPSVGAGAVLADIIRS
ETIPTIRLTEIFRQAASSRIIMNAHRINKGELPLRDESNTLSDFYLIAANTPEEIYNRLL
TVITERIPARFGLHPVRDVQVLTPMNRGGLGARALNVELQKVLNGQVEPSVTRFGTRYAA
GDKVIQMVNNYDKEVFNGDIGHISAVEREDGAVLVDFDGTLVSYEFGELDELSLAYATSI
HKSQGSEYPAVVIPLAMQHYNLLERNLIYTAVTRGKKLVVIIGETRALAMAVKNHKAMRR
LTGLAERLSALARYEANL

NT seq 2217 nt +upstreamnt +downstreamnt
atgagcgttcaggatgggcaagaatcctactattattcccccaaagagcgactaagtggc
gcggttgaaagggtaacctttcatagccaaaaaaatggcttttcagttctccgcattaaa
gtaaaagggcgtcgtgatttagtaaccgttgttggtgcgacgccctccattgcgccgggt
gaatttgtggagtgccttggagagtggcacaacgattctacctatggtttgcaattccgc
gcaactgagcttaccgttgttccccccgaaaccattgatggcattgaaaaataccttgct
tcgggcatggtaaaaggtattggtccgcactttgcaaaaaccttagtgtatgcctttcgc
gaagatgtatttaccgttatagaagaggagcctgagcgcttgcttgagttgcccggcatt
gggcaaaagcgcatggaaatggtaacaagcgcatgggctgaccaaaaggtaattcgcgat
atcatggtctttttgcaatcacacggtttaggcacaagccgtgcggtgcgcatttttaaa
acctacggtaacgagtcaattttgcgggttaaggagaatccttaccgcttagtgcttgat
atttatggcgtgggttttaaaacggctgatgctcttgctatgcagcttggcattgccccc
gattcgctgattcgtgcgcaagcgggcgtacaccatgtgttgcaggaaattgcctcatcg
gggcattgtgcggcacctcgtgaacagcttgtggctgaagcgtctcgcttacttagcatc
cccgaagagcgtactcacgaggcaattgatgctgaattgcgagcaggcaacttagtgcgc
gaagagctgcgaggcgtggaaacactctacttgctttcgctccaccgtgccgaacttggt
gtagcaacctccttaatgcgcttgcttgagggcgaaattccctggaggcacttagccatt
gaggaggcgctgccgtgggttgaagcacaaaacaatatcaccctttcaccctcccaaaaa
gaggcgctccatacagcacttaccaacaaagtaactgttattacgggcggaccaggtgtg
ggtaaaaccaccttagtaaaaagcattctgctcattttgcaagcccaaaaagtgcgtgtg
gcactttgcgctcctacaggacgtgcagcaaaacgcctctcagaatccacaggacttgaa
gcaaaaaccatccaccgcttgctggaatttgatcccctaacgggtggctttaaacatcaa
cgcgataatcccttagagtgcgatttagtagtggttgacgaaagctcgatggttgacgta
gtgcttatgaaccgcttgcttgccgctgtgcccgaaaaagccgctcttctgctgattggc
gatgttgaccagctaccatcggtaggagcaggcgccgtgcttgccgatattatccgctcc
gaaaccattcccaccattcgcttaaccgaaatttttcgccaagccgcttcgtcgcgcatt
attatgaatgcccaccgcattaataagggtgaactgccattacgcgatgaaagcaacacg
ttaagcgacttttacctcattgcagcaaacactcccgaagaaatttataatcgcttgctt
accgttattaccgagcgcattcctgcccgctttgggcttcaccccgtgcgcgacgtgcaa
gtgcttacccccatgaatcgtggaggacttggcgcacgagcgcttaatgtggagctgcaa
aaagtgctaaatgggcaggtagaaccctccgtaacgcgctttggcactcgctacgccgca
ggcgataaggtgattcaaatggtcaacaattacgataaagaggtctttaatggcgatatt
gggcacattagcgccgttgagcgcgaagatggcgcggtgttagttgactttgatggaaca
ctcgtaagctatgaatttggggaacttgatgagctatcgcttgcctatgcaaccagcatt
cacaaaagccaaggctccgaatatcccgcagtggtaattccccttgccatgcaacattac
aaccttttagaacgcaaccttatttacaccgccgttacacgaggcaaaaagttagtggta
attattggcgaaacccgcgcgcttgccatggcagttaaaaaccacaaagctatgcgccgc
cttacaggattagcagaacgcctttccgcccttgctcgttacgaagcaaacttgtag

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-CCH (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (44)   
   Pfam (44)   
All databases (54)   

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