KEGG   Coprinopsis cinerea: CC1G_04740
Entry
CC1G_04740        CDS       T01275                                 
Name
(RefSeq) transcription initiation factor IIB
  KO
K03124  transcription initiation factor TFIIB
Organism
cci  Coprinopsis cinerea
Pathway
cci03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cci00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CC1G_04740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cci03021]
    CC1G_04740
Transcription machinery [BR:cci03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     CC1G_04740
 Prokaryotic type
  Archaeal type
    TFB
     CC1G_04740
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon HTH_Tnp_ISL3 Cyclin_N RB_B zinc_ribbon_10
Other DBs
NCBI-GeneID: 6014876
NCBI-ProteinID: XP_001838296
UniProt: A8P2D9
Position
13
AA seq 340 aa
MAYNTQGFTLANQASKATEPTFGPDLSVRLICPECKDPNPQIVEEFASGDLVCGNCGLVL
GDRVVDTRSEWRTFANDEGDDPSRVGAASDPLMDGMEQLDTVISFRDGGSGISRELQRAA
SRAQSSRTERNLLTAFRDISNWCDQFSLPKTISDIAKQLYKRTDEEKLLRGKPLEAVIAA
CIFIACRQAHVPRSFKDICSLTHVSKKMLGQCYKVLERAFTQVGAAPSSGPEGFLVRYCN
YLDLPPNVQGICRDVIVAAREHGIADSRSPLSIAGGAIYFCCMLLGHTRTLREISQVAGV
TETTIQSVYRLYYFEKEKLVKKEWLESGKADMSRLPVEYR
NT seq 1023 nt   +upstreamnt  +downstreamnt
atggcctacaacacgcaggggttcacattggccaaccaggcctccaaagctacagaacca
acgtttggtcccgacctctcggttcgcttgatttgcccagagtgcaaggacccgaacccg
cagatcgtcgaggagtttgcgagcggcgacctggtttgtggcaactgtggactggtgctc
ggagacagggtggtggacacgcggagtgaatggcggacgttcgccaacgacgagggagac
gatccttctcgtgtcggtgcagcgtctgatcctctcatggacggtatggagcaactcgac
accgtgatcagtttccgcgatggaggctcggggatctcccgtgaactccagcgcgcggcc
tcccgtgcccagagctcgcgcaccgaacgcaacctcctcaccgccttccgcgatatctcc
aactggtgcgaccagttctccctcccaaagaccatcagcgacatcgccaagcagctgtac
aagcgcacggacgaggagaagctgctccgcgggaagcccctcgaggccgtcatcgcggcg
tgcatcttcatcgcgtgtcgccaggcgcacgttcctcgcagtttcaaggatatttgctcg
ttgacgcacgtttcgaagaagatgctggggcagtgttataaggtgttggagagggcgttt
acacaggttggcgcggcgccgtcgagtgggccggaggggttcctcgtgcggtactgcaac
tatttggacttgccaccgaatgtgcagggcatctgtcgcgatgttatcgtggcggcacgg
gagcatggtattgccgacagtcgcagcccgctgtctatcgctggtggcgccatttatttc
tgctgcatgcttctgggacataccaggaccctcagggagatcagccaggtggcgggtgtg
accgagacgaccatccagtcggtgtatcggctgtattatttcgagaaggagaagctggtg
aagaaggagtggctcgagtctggaaaggctgacatgtcgcgtcttccggtggagtaccga
tag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (27)   

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