KEGG T01661: Clocl

Clostridium clariflavum DSM 19732: Clocl_0924

Entry

Clocl_0924 CDS T01661

Definition

helicase, putative, RecD/TraA family

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

ccl Clostridium clariflavum DSM 19732

Pathway

ccl03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:ccl03440]

SSDB

Motif

Pfam:

HHH_4 AAA_30 UvrD_C_2 AAA_19 AAA_11 Viral_helicase1 HHH_5 PIF1 Helicase_RecD AAA_28 T2SE HHH_3 HHH AAA HHH_2 SRP54 DUF2075 ArgK AAA_12 PhoH AAA_25 DEAD NTPase_1 Thymidylate_kin AAA_14 ResIII AAA_22 IstB_IS21 CbiA UvrD_C

Other DBs

NCBI-GI:

374295335

NCBI-GeneID:

11561293

UniProt:

G8LWH6

Position

1070071..1072221

AA seq 716 aa
MEYLSGVVERITYVNEENGFCVIKIKSHGFSDLVTVVGNLAAVNVGSTLKLKGNWKFDSK
YGRQFNAIDYQETVPATIAGIEKYLGSGLIKGIGPVYARRIVKHFKEDTLRVIEENPDAL
LEVEGIGQKRVDMIKKAWAEQKEIKNVMLFLQSNGVSTAYAVKIYKTYGNESINIVKSNP
FRLADDIWGIGFKTADKIAQQLGFEKNSFERCKSGIIYVLNELSNDGHCYLKREQLVAEA
VKMLEAEESLVNATLDRMIEEKIVIFDEDNAVYLPTLYYCETGVAKRIREILSEKSKISA
INIDRIVTRIQEEYNISYDEVQLEAIRTAAASKFMVLTGGPGTGKTTTTLAIIKVYQKMG
LKVLLAAPTGRAAKRMSETTGMEAKTIHRLLEFKPAEGYQKNSENPLDCDVLIIDETSMV
DIVLMYNLLKAVANETIVILVGDVDQLPSVGAGNVLKDIIDSGIVKVIKLTRIFRQALGS
AIITNAHRINKGEMPILKGGRNSDFFYIQEEEPTKIAETIKSLCSKRLPDYYKVDPINDI
QVLCPMQRGEVGAQNLNNILQEALNPGDVTIKYGGTIYRLKDKVMQVKNNYDKNVFNGDI
GIISRIDMEDKTVTISFDGNEVEYDATELDEIVLAYATTVHKSQGSEYRIVVAPFTMQHY
MMLQRNLLYTCVTRAKSVFVLVGSKKAIGIAVSNSKIQQRNTMLAKRLQEENKATM

NT seq 2151 nt +upstreamnt +downstreamnt
atggaatatttaagtggagttgttgaacgaattacatatgtaaatgaggaaaacgggttt
tgtgtcataaaaataaaatcccatggtttttctgaccttgtaaccgttgtggggaatctt
gcggccgttaatgtcggttcaacacttaagttaaaaggaaactggaagtttgacagcaaa
tacggcaggcagtttaatgccattgactatcaggagacagttccggctaccatagcaggg
atagagaaatacctgggcagcggcctgataaaaggcataggtcctgtttatgcccgtcgc
attgtcaaacattttaaggaagataccctccgagtaatagaagaaaatcccgatgctctg
cttgaagtggaaggcattgggcaaaaacgggtggatatgattaaaaaagcctgggcggaa
cagaaagaaataaaaaacgttatgctctttctccaaagcaatggggtatcgacggcctat
gctgtaaaaatatataagacttatggaaatgagagtataaacatcgttaaaagcaaccct
ttccggcttgctgacgatatatggggaatcggttttaaaaccgctgataagatagctcaa
cagcttggttttgagaaaaactcctttgaacgttgcaagtcggggattatttatgtgctg
aacgagctttcgaatgacggacattgttatttaaaaagggaacagcttgtggctgaagca
gtgaagatgctcgaagcagaagagagtttagtaaatgccacccttgacaggatgattgag
gagaaaattgtaatattcgatgaagataatgccgtttatcttcccaccctttattactgt
gagaccggtgttgccaaaagaattagggaaattctctctgagaaaagcaaaatatcagca
attaatattgatcggatagttacccggatccaggaggaatacaatatatcctatgatgaa
gttcagttggaggctattagaactgcagctgcttcaaagttcatggtattaaccggagga
cccggtacagggaaaactacaactaccttggctattattaaagtatatcaaaagatggga
ttgaaggttttgctggcagcacctacaggccgtgcagctaaaagaatgtctgaaactaca
ggcatggaagctaagaccatccatcgtcttcttgaattcaaaccggctgaaggataccaa
aaaaattctgaaaatcctttagattgcgatgtattgattattgatgaaacttctatggtg
gatattgttctaatgtacaaccttttaaaagctgtggccaatgaaacaattgtgattttg
gtgggggatgtggatcaactgccgtcagtgggagcgggaaatgtactcaaggatataatc
gattccggtattgtaaaggttatcaaactaacgaggattttccgccaggctttgggaagt
gccattataacaaatgcccatagaattaacaagggagagatgcccatattaaaaggtggg
cgaaacagtgattttttctacattcaggaagaagaaccgactaaaattgctgagacaata
aaaagcctgtgttccaaacgtttacccgattattataaggttgatcccataaatgacata
caggtgctgtgtccaatgcagagaggggaagtgggggcacaaaacctcaacaatatcttg
caggaagctttaaatcccggtgatgtgacaataaagtacggcggtacgatataccgctta
aaggacaaagttatgcaggttaaaaataattacgacaaaaatgtctttaatggtgatata
ggtataataagcagaattgatatggaggacaaaacggtaacaataagttttgacggaaat
gaagtagagtacgatgccaccgaactggatgagattgtgctggcctatgccactactgta
cataaaagccagggcagtgaatacagaatagtagtagccccctttacaatgcagcattac
atgatgctgcaaagaaatttgttatatacatgtgtgaccagagccaaaagtgtattcgta
ctggtgggctcaaaaaaagcaataggaattgccgtgtccaacagtaaaatacaacagcgc
aatacaatgctggcaaaaaggcttcaagaagagaacaaagcgacaatgtaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (30)   
   Pfam (30)   
All databases (39)   

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