KEGG   Acetivibrio clariflavus: Clocl_1069
Entry
Clocl_1069        CDS       T01661                                 
Name
(GenBank) 23S RNA-specific pseudouridylate synthase
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
ccl  Acetivibrio clariflavus
Brite
KEGG Orthology (KO) [BR:ccl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ccl03009]
    Clocl_1069
Enzymes [BR:ccl01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     Clocl_1069
Ribosome biogenesis [BR:ccl03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Clocl_1069
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AEV67744
UniProt: G8LXN3
Position
1253967..1254695
AA seq 242 aa
MSLHKSIKINILYEDNHLLVVEKPVNVPVQKDSSNDIDMLTLLKEDLKVRYNKPGNVYLG
LVHRLDRPVGGVMVFAKTSKAASRLSDQVRTRGLGKTYVAVVHGKLDSRKGRLENYLLKD
EKANRVSIVSPEVKGAKQAILDFYVIGEAKGFTLVKIDLHTGRSHQIRVQFSHIGHPLYG
DQRYGNKVNKVGQQIALWSYGIGFKHPTTGEELEFLCKPPDLEPWNWFGEVSDKISNTGC
IT
NT seq 729 nt   +upstreamnt  +downstreamnt
atgagcctccataaaagtattaaaattaatattttgtacgaagacaatcatttgctggtg
gtggaaaaacccgttaatgttcctgtccagaaggacagcagcaatgatattgatatgctt
acacttctaaaagaggatttgaaggttaggtataacaagccgggcaatgtttatttggga
cttgttcatcgtttggacaggcctgttggcggtgtaatggtttttgccaagacttcaaaa
gcagcatcaagattatcagaccaggtgcgtacgagaggacttggcaaaacttatgtcgca
gtggttcacggtaagttggacagcaggaaaggaaggcttgagaattatcttttaaaggac
gaaaaagccaatagggtaagtattgtatcacctgaggtaaagggtgccaaacaggcaatc
ttggacttctatgttataggggaggctaagggctttaccctggtcaagattgatttgcat
acgggtcgttcccatcaaataagagtacaattttctcatatcggccatcctttgtatgga
gatcagcgttacggaaacaaggttaataaggtaggtcagcaaatagcactatggtcttat
ggaataggatttaagcaccctactacgggggaggaactggaatttctgtgtaaaccgcct
gatttagagccttggaactggtttggagaagtttcggataaaataagtaacactggttgc
attacatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

Download RDF
DBGET integrated database retrieval system