KEGG   Capnocytophaga canimorsus: Ccan_17610
Entry
Ccan_17610        CDS       T01582                                 
Name
(GenBank) Holliday junction ATP-dependent DNA helicase ruvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
ccm  Capnocytophaga canimorsus
Pathway
ccm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ccm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Ccan_17610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccm03400]
    Ccan_17610
Enzymes [BR:ccm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Ccan_17610
DNA repair and recombination proteins [BR:ccm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Ccan_17610
    RecFOR pathway proteins
     Ccan_17610
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_22 Mg_chelatase AAA_3 TIP49 AAA_16 nSTAND3 AAA_14 AAA_18 RNA_helicase Rad17 AAA_33 AAA_PrkA TsaE NB-ARC AAA_28 NACHT NTPase_1 AAA_17 AAA_24 AAA_11
Other DBs
NCBI-ProteinID: AEK23877
UniProt: F9YSF2
Position
1911414..1912436
AA seq 340 aa
MNKNLDPNKDRYSPQELDIEKALRPLSFDDFAGQEAVLENLTVFVKAANMRHEALDHTLF
HGPPGLGKTTLAHILANELGVGIKITSGPVLDKPGDLAGLLTNLQERDVLFIDEIHRLSP
VVEEYLYSAMEDYKIDIMIESGPNARTVQINLNPFTLVGATTRSGLLTAPMRARFGIQCR
LQYYSTELLADIVQRSASILKVPITMEAAIELAGRSRGTPRIANALLRRIRDFAQIKGNG
AIDMEITQFGLKALNVDAHGLDEMDNKILLTIIDKFKGGPVGITTLATAVSESAETIEEV
YEPFLIQQGFIVRTPRGREVTDLAYKHLGRIDTNRQGMLF
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgaataaaaatttagacccaaataaagaccgttattctccgcaagaattagatatagag
aaagcccttcgtccgttatcatttgatgactttgcagggcaggaggctgttctggagaat
ttgaccgtttttgttaaagctgccaatatgcgccacgaagcccttgaccatacgctcttt
cacggacctccaggattaggaaagactactctggctcacattctagccaatgaattaggg
gtaggtatcaaaataacttcaggtcccgttttggataaaccaggtgatttggcagggctt
ttgactaatctgcaagaacgcgatgtccttttcattgatgagatacatcgtttgagcccc
gtggtagaggaatacctatactccgctatggaggattataagattgatattatgattgaa
tcaggacctaatgctcgtaccgtacaaataaacttaaatccgtttactctggtaggagcg
accacccgctcggggttacttactgcaccgatgagggcgcgttttggtattcaatgccga
cttcaatattactctaccgaactcttagccgatatagtacaacgcagtgcctcaatactc
aaggtgcctatcactatggaagccgccattgaacttgcaggaagaagccgtgggacccct
cgtattgccaatgcactgttacgtcgcattcgagattttgcacaaatcaaaggcaatgga
gctattgatatggaaatcactcagttcgggctcaaagccctcaacgttgatgcccacggg
ttagatgaaatggataacaaaatcttacttaccataatcgacaaattcaagggaggtccg
gtgggtataaccactctagctacagctgtttctgaaagcgccgagaccattgaggaggtg
tatgagccttttctcattcagcaaggatttatcgtcagaaccccacgaggcagagaagtt
accgatttggcatataaacacttaggtagaatagatacgaatcggcaaggaatgctgttt
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (25)   
   Pfam (25)   
All databases (35)   

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