KEGG   Chondrus crispus (carragheen): CHC_T00002178001
Entry
CHC_T00002178001  CDS       T02916                                 
Name
(RefSeq) hypothetical protein
  KO
K14319  Ran GTPase-activating protein 1
Organism
ccp  Chondrus crispus (carragheen)
Pathway
ccp03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CHC_T00002178001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccp03019]
    CHC_T00002178001
Messenger RNA biogenesis [BR:ccp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     CHC_T00002178001
SSDB
Motif
Pfam: LRR_6
Other DBs
NCBI-GeneID: 17320924
NCBI-ProteinID: XP_005713207
UniProt: R7Q5W4
AA seq 408 aa
MISPPSPMAHFSIDATKREALTASRAEELLRDLSAGITSVKLSGVSFGDGSAPVAAEALS
RAAATLRDVDLSDIIASRPEDEAKRALTVIADALSICDALRSLNLSDNALGAKGIRALGS
LLAGRAELQELLLCNNGLAADAGDLIASAVLETAPTKLKKLHFHNNLLETAGSVALAPIV
DNSPMLEDFRFSSLRLGRDGSVRICKALHPRLGETLRHLNLSDNTFGEEGAEALADVLGD
AAVLETLLLRDDALGDDGVQAVCKALVHGAPRLFKLDVSGNEMEAGAARQLGKLVSVGRL
TEVLAEDNELGSSGACALAREISEEARVEVLDVSSSEIGGRGALRLATAVQELEGLKTLR
MDANCIPRSVVEQVEELLGERLGGLEENDEEGEESEEEEDEEDEDAED
NT seq 1227 nt   +upstreamnt  +downstreamnt
atgatttcccctccgtccccgatggcgcacttctccatcgacgcgacgaagcgcgaggcc
ctcaccgcctcacgcgccgaggagctgctgcgtgacctgtcggccggcatcacatcggtc
aaactgtccggtgtcagctttggagacggctctgcccccgtcgccgccgaggccctgtct
cgtgccgcggctacgctgcgggacgtcgacctgtctgacattatcgcgtcgcgccccgaa
gacgaggccaagcgcgcgctgaccgtcatcgccgatgccctgtccatctgcgacgccttg
cgctcgctcaacctgagcgacaacgccctaggcgcgaagggcatccgcgccttgggctcg
ctgctcgcgggacgcgccgagctgcaggagcttctgttgtgtaacaatggcctcgcggca
gacgcaggcgatttgatcgctagcgccgtgctagagacggcgccgacaaagctgaaaaag
ttgcactttcacaacaacttgctcgagacggcgggctccgtagcgctggcgccgatcgtc
gacaactcgcccatgctcgaggactttcggttttcgagcttgcgactggggcgtgacggg
tcggtgcgcatctgtaaggcgctgcacccgcggcttggtgagacattgcgccacctcaac
ttgtcggacaacacgtttggagaggagggggccgaggcgttggcagacgtgcttggggat
gcagcggtgttggaaacgctgctattgcgcgacgacgctctcggtgatgacggggtgcaa
gccgtgtgcaaggccctggtgcatggggcgcccaggctgttcaagttggatgtgtctggg
aacgagatggaagcgggcgcggcgcgacagttgggcaagctcgttagcgtaggcagattg
acagaggtgctggcagaggacaacgagctagggagctcgggggcttgcgcgctggcgcgc
gaaatttcggaagaggcgcgagtggaggtgttggacgtgagcagttcggagatcgggggg
aggggagcgctgcggctggcaacggcggtgcaagagttggaggggctgaaaacgttgcgg
atggacgcgaattgtattccgcgtagcgtggtggagcaagtggaggagcttttgggggaa
cggttgggtgggttggaggagaacgatgaggagggcgaggaaagtgaagaagaggaggac
gaggaggacgaggacgctgaggattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (21)   

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