KEGG   Chondrus crispus (carragheen): CHC_T00007514001
Entry
CHC_T00007514001  CDS       T02916                                 
Name
(RefSeq) hypothetical protein
  KO
K10885  ATP-dependent DNA helicase 2 subunit 2
Organism
ccp  Chondrus crispus (carragheen)
Pathway
ccp03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    CHC_T00007514001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccp03400]
    CHC_T00007514001
DNA repair and recombination proteins [BR:ccp03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA-PK complex
     CHC_T00007514001
SSDB
Motif
Pfam: Ku Ku_PK_bind SLX9
Other DBs
NCBI-GeneID: 17318885
NCBI-ProteinID: XP_005711171
UniProt: R7QQV6
AA seq 782 aa
MEYEPEIPQPRESETLLIVVDTYVTEPSTFLSLRDAAMRMARTRLLYSLLRDDLLAVIAS
GSSTTKNKLASENEGGYLGLCVLQSPVSKNLNAVRVLADLKQGMQPSNLLNALEVCGDTL
SEPAVTRSKKKRVVLFTDALQISKSLCPDDVEDFQAICELYKAQEIQIDVIYDCEQQLVE
KLQEIEEVVEDADLLSIKDWMNKTKGFQLSHLFSLCKFSGGVFMSRKEASPLVDIPTPKV
KRATAKYRGTLNIADVVKIPVMRYSYVYASTPVTPKKLSWEASTKCINPIPVFVETQRVA
SAKDDAPLKPEEIINAYPYGPELVPEQNEVDTYAWSIVLPKGLDILGFVEQNSVPQRLFM
GRVDVVIAMPSVPGADELMKTLVLAMQAENVGILARSVTTKKGGAPSLVYLWPRVEAERE
TGALRSFFLFQVEIPMREDVRDMPFASLMETAEEIPEAADLAMSRFISAATLDVEAEHGD
GDEDDREEPVWPSEICNPNLDWNNICIIHRALAGISGADFPSLTEWQQHLISPLSFIGDN
RKEGLRSAILNLKSAIPVIPAQKKEKKGKRTHEVLNGDMASISDYLPREMVEGLDEREAD
DEGGDGQNAATMLADASDDVLSLTGLELEDVGDETPVLDFENLVTMNKFNFAAVSLLVVV
RRLIRDVVDDDRAMNCLQALRKASVERKEPRFFNDFIISLIARCKREDTTGNRTRAFFRH
VHRCHTINSTVQVISIAKRSEGGSESAADEAYREFLSNATKRIHAIVSKEPHDVSVSAVT
NS
NT seq 2349 nt   +upstreamnt  +downstreamnt
atggagtatgaaccggaaattccccagccacgtgagtcagaaaccctgctaattgtcgtg
gatacgtacgtcactgaaccatcaacattcttgtctctaagagatgcggcaatgcgaatg
gcgcgtactcgtcttctctatagcttattaagggatgacttgctcgcagtcatcgcgtcc
ggctcgtccacgacgaaaaataaactcgcttctgagaacgagggagggtatttgggcttg
tgtgtgcttcaatcacccgtatcgaagaatctcaatgctgtgcgcgtccttgcagacctg
aaacaagggatgcagcctagtaatttactgaatgcactggaagtctgcggagacactctt
tctgaacccgccgtgacccgttcgaagaagaagagggtcgtattattcacagatgcttta
caaatctctaaatcgctttgtccagatgatgttgaggactttcaagcgatttgcgagctc
tacaaagcacaagaaatacaaatagatgtcatatacgattgcgaacagcagcttgtggag
aagctgcaggaaattgaagaagtggtcgaagatgccgacttgctctcaatcaaagactgg
atgaacaaaacgaagggctttcagttatcccatttgttttctctatgcaagttttcggga
ggtgtttttatgtcgcgaaaggaagcttctccgcttgtagacataccgacgccgaaggtc
aaaagggctacggcaaagtatcggggcactctcaacattgcagacgttgtcaaaattcca
gtgatgcgatacagctatgtctatgcgtccacaccggtcaccccgaagaaattgtcttgg
gaagcttccaccaagtgcattaacccgattccggtttttgttgaaactcaacgcgtggca
tcagcgaaagacgatgcgccactgaagccagaagagatcatcaacgcgtatccgtacggc
ccagaattggtccccgaacagaatgaagtagacacatacgcatggtccatagttttgccg
aaaggactagatatactcggttttgtcgaacagaattccgttcctcagcgacttttcatg
ggccgagtggacgtagtgatagcgatgccgagtgtgccaggagctgatgaattgatgaaa
actttggtgctggcaatgcaagcagagaacgttggaatcttggcacgatctgttaccact
aagaagggaggggctccgagtttggtatacctctggccccgtgtcgaggctgagagggaa
acaggtgccttgcgaagcttctttctttttcaagtggagattccgatgcgtgaagatgtt
cgtgatatgccgtttgcgtccttaatggaaacagcggaagaaatcccagaggccgctgat
cttgccatgtcacgatttatttctgcagcaacattggatgtagaggcagagcacggggat
ggagatgaagacgaccgcgaagagcccgtgtggccctcggagatatgcaacccgaatctt
gattggaacaacatctgcattatccatcgggctcttgctggtatatctggtgcagatttt
ccttctcttactgagtggcaacagcacctgataagcccgctttcgtttatcggagataat
aggaaggagggcttgcgcagcgcaattctgaacctgaaaagcgccattcctgtgattccc
gctcaaaagaaagaaaagaaaggaaagagaacgcatgaagtcttgaacggggatatggct
tcaatttctgattacctgccaagagaaatggttgaaggtcttgacgaaagagaagcagac
gatgaagggggagatggtcaaaatgcagcaacaatgcttgcagacgccagtgatgatgtt
ctttcgttaacgggtctcgagctagaggacgtcggcgacgaaacccctgtgttagacttt
gaaaaccttgtcaccatgaacaaatttaatttcgctgccgtttcgctgctagttgtcgtt
cgccgtctgataagggatgtagttgatgatgatagagcgatgaattgtttgcaggccttg
cgaaaggctagtgtggagaggaaagagccgcgtttcttcaatgattttataatcagttta
atcgcgagatgcaaaagagaagacacgactggaaatcgcacgcgtgcattctttcgccat
gtgcatcgctgtcacaccattaattctactgtccaggtcatttcaattgcgaaaaggagt
gaggggggatcggaaagtgcagcagatgaggcctaccgggagtttttaagtaacgcaacg
aaacgcattcacgcaattgtttcaaaggaacctcatgatgtttcggtatcagccgtcaca
aattcgtaa

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