KEGG   Chondrus crispus (carragheen): CHC_T00009561001
Entry
CHC_T00009561001  CDS       T02916                                 
Name
(RefSeq) WD40-repeat containing protein
Organism
ccp  Chondrus crispus (carragheen)
SSDB
Motif
Pfam: NB-ARC TIR_2 ANAPC4_WD40 WD40 PQQ_2 TIR APAF-1-like_WHD PQQ eIF2A APAF1_C
Other DBs
NCBI-GeneID: 17327103
NCBI-ProteinID: XP_005719383
UniProt: R7QLW1
AA seq 1616 aa
MQESYQQDSIDVFISHAGPDKLNIARPLFEKLEADGKKFFLDKKSMQPGDCGPDEMTKAM
ESAKVGVFILSPEFAARKWTMRELRCFLRRRREARSDGMLPPTLIPVFYRLSIRECRKLE
PSEHQDIEGNNIFEVEKFFSEERQGEASTEMVKRELQELADITGIENDEKATNRLEDEFS
HLARKQLVERVFLAVKKKCEEHSSDVVTEGVHGPLEEEAKRSSASGDARHQMRTTSAEDP
KKDGFKASFQVPKNPDHVILKFGRSEDAGNSTERMTAPEERLRRSVLRPGDRQNVGAVGA
RRGGVVGTKGMGGIGKSCALRGLASDEEVRSRFCDGIYWLVLGQDATERGVIEHLARITR
ESGGETQAKAVREESVLYSAVSRVTEWFKGKTILLLIDDVWREGMVGREGIAGSKVMSRL
REIADVENSSRTAFTAREWGVVEGSEEIQFSTKEDASSLEILLKSADIQREEVEGLGDQT
DRILRFCGGLPLALSVVGRAIARHREIAKELCLKNVLDEYLECLEDTSSILLDERADGTY
LYENLSMAFEVSLCMMDRKKTRDGQLMSYAEMYESLVVIRRQGWLPLSVLCLLWRRKGKA
QALKVLHEFVEASLVERKDGVSSGRKIAGVRLHDLQLDYVQQRCGNGGEKRWHEKLVQEW
QWNESENRQEAPPWVCGRGWKKDMVEDEYFRHNLCRHLKGAQLGEDLWDVLSDARWVAEK
LTRAEGLNLQEDFKILTDVAGEDGERCEAGGRLWSLQKIARQARLSASFVRRSSREVWFQ
LYDGLLRFRNESEVIGEFLRRIEEVAEKPWLKSLTPGLNVSGAVQHIFPDQGRVVGMSGC
AAKNEVIAWGDDEKHLFRRTFRDGEMKENELFEVAWGVSRFWSENGKYVAVVQADRTSVQ
VWDMHTGATAKRVGQEVDVGHLGRCTFDLTGDGKRVAFGGAYGVVVLWDVERGVKIKGAA
NMWGHVVKKVSLSPGGKRLACMGKCGSNVSILILCAETGEMVRVIGVPSIRLFDFDRPKW
LISWSKNGKRVACVFKMERRKIEGTVSEARLWIFDGETGRSIAESAPLEDVRCLSWSEDG
TLLCCGEYCIDDLGVVSVWDGRSGKRISKFDDFRARAISLSGDGRWLAASSFGGKVSVRD
TKTGAEVWRHMATHGSHVEVLGWLEDGKRMFSVDDNFNIVIWRWDNVERVQEEEEEVDKV
NKERRKFTAVAWSSDDICATVVGDGDVVMYDVKTGKKMWGDAETHVSPVHCLKMSRDSKR
VFTAAEDGKFAMWDSKTGDKLWECGEDRAKDKYAAAEACWSNDGTRVFVSFGRRVGLWDG
KTGNKLWERIADAYIHIRCMAWAGNDTKIALGGSANEGRVVLLSARTGEAIRVACGHTDG
GVVLRGAKTGETMGDAPERVPDSVGLKWAADQGLLELYSDEFADEVHIDWFNFVKRPWRE
GEEGVRASFSVERAPFSVGRALFPDNGSPVAVKWSPDDKWIASTGYNMVEIDENGKPSRV
GVMIWNWETGVTYRYQCQLERYYKDGLPRYPLEWSDDGRRVALGIGRRVALGIGEEVMLR
YSTKSEVLMQIAWFRDGSRIATLGVANSDVGCKVRWRNVANPVRDKSKRCLRKAIR
NT seq 4851 nt   +upstreamnt  +downstreamnt
atgcaggaaagctaccagcaagactctatcgatgtgttcataagccatgctggcccggac
aagctaaacatcgcacgtcctcttttcgagaaattggaagctgatggtaaaaagttcttc
ctcgacaagaaatcaatgcagcccggtgactgcggaccggacgaaatgacgaaggccatg
gaatctgcgaaggtcggtgttttcattctttctcccgagtttgccgctcgaaaatggact
atgagggagctgcgctgcttcctacgccgacggagagaagctagaagcgatgggatgctg
ccgccgacactgattccggtgttttacagactaagtattcgggaatgtagaaagttggag
cccagtgagcatcaggatattgaaggaaacaatatttttgaagttgagaagttttttagc
gaggaacgacagggcgaggcgagcacggaaatggtgaagagggagctacaagagctggca
gatatcaccgggatagaaaatgacgaaaaggcaacgaaccggttggaagacgaattcagc
catcttgcaagaaaacaacttgtggagcgagtatttctggctgtgaaaaagaaatgtgag
gagcactcgagcgatgtagtgacagaaggcgtacatggcccactcgaggaagaggcgaag
aggagcagcgccagtggcgatgctcgtcatcaaatgcgtactacatccgcggaggacccg
aagaaggatggcttcaaggcttcgtttcaagtgccaaagaacccggaccatgtcatactg
aagtttggacgcagtgaagatgctggcaacagtacggaacgtatgacggctccggaagaa
cgattgaggcggagtgttttgcgtccgggagaccgtcaaaatgttggtgctgttggagcg
cgccgtggaggggttgtggggacgaaggggatgggaggcatcggaaagtcttgcgcccta
cgcggtctggcctcggatgaagaggttcgcagccggttttgcgacggtatatactggctg
gtgctcggtcaagacgcgacagaacgaggagtaatagaacatctggcccgcatcacgaga
gaaagcggaggggaaacgcaagcgaaggcggtgcgtgaagaaagcgtgttatactctgcg
gtttcgagggtcacagagtggttcaaagggaagacaattttgttacttatcgacgatgtc
tggagagaaggcatggtcgggagagaaggcatagccggaagtaaagtcatgtcaagactg
agagaaattgcggatgtggagaacagcagccgtacagcgttcacagcgcgagagtggggc
gtggtggagggaagcgaagaaatccaattttcgacaaaggaagatgcttcctctctggaa
atcttgctaaagtctgctgacatacaacgtgaagaggttgagggcctgggggatcaaacg
gataggatactgaggttttgcggtgggcttccgcttgcgctgtccgtggttggcagagcg
attgcgagacatcgtgagattgcgaaagaactttgtctgaaaaatgtgcttgatgagtac
ttggagtgtctagaagatacatcgtcaatactattggacgaaagagcggatgggacgtac
ctatacgagaacctgtcaatggcgtttgaagtttcgctgtgcatgatggatcgaaagaag
accagagatgggcagttgatgtcctacgccgagatgtacgagtcgctggtggtcattcgg
cgccaaggatggttgccgttgagtgtgctctgtttgttatggagacggaaaggaaaagct
caggcattgaaagtgctgcacgaattcgtggaggccagtctagtggaacgaaaggatgga
gtgtcaagtggtcgcaagatcgccggagtcaggttgcacgatttgcagctcgattacgtg
caacagagatgtgggaatgggggagagaagaggtggcatgaaaagcttgtgcaagaatgg
caatggaacgagagtgagaacaggcaagaagcgccgccgtgggtttgcgggagagggtgg
aagaaggatatggtggaggacgagtatttccgacacaacttgtgccgccatctcaagggg
gcgcagctgggcgaggatttgtgggatgttttgagtgatgccaggtgggtggcagagaag
ttaactcgggcagaggggctaaatcttcaagaggatttcaagattttgacggacgtagcc
ggggaagacggagaacggtgcgaagcgggaggcaggctgtggtcgttgcagaagattgct
agacaggcgaggctgagtgcgtcctttgttcgtcgaagttcgagagaggtatggtttcag
ctgtacgatggtctgttgagattcaggaacgagtcggaagtaattggagagttcttacgc
aggatagaggaagttgcggagaagccgtggttgaagtcgcttacacctggcttgaacgta
tcaggcgcggtgcaacacatatttccggaccaggggagggtggtgggaatgtcgggatgc
gcagctaagaacgaagtgatcgcttggggggatgatgagaagcatctgtttcgtcggaca
ttccgggacggggaaatgaaagaaaacgagttgtttgaagtggcatggggtgtgagcagg
ttttggtcggagaacggaaagtatgtagcggtagtacaggcagatagaacaagcgtgcag
gtgtgggatatgcatacaggagctacagcaaagcgagtcggacaggaagtggatgtaggg
cacctgggccgttgcacttttgacttgacgggggatggaaagcgagtagcgtttggggga
gcatatggtgtggttgtgttgtgggatgttgagagaggtgtgaagatcaagggggcagcg
aatatgtggggccatgttgttaagaaagtatcgctttcaccgggcgggaaacggttggcg
tgcatgggaaaatgcggctcaaacgtgtcaattttgatactgtgtgcagagacaggggag
atggttcgggtgattggcgtgccgagtattcgactgttcgacttcgatcggcccaagtgg
ttgatttcgtggtcgaagaatggaaagcgggtcgcgtgcgtgttcaagatggaacgtaga
aaaattgaaggaacagtatctgaagcaagattgtggatctttgacggggagactggtagg
agtatcgcggaaagcgcgcctttggaagacgttcgctgtctttcatggtcggaggacggg
acgctgttgtgctgtggcgagtactgtatcgacgatctgggtgtggtgtcggtatgggac
ggacgctcggggaagagaatatcgaaatttgatgattttcgggcaagggcaatatctctg
tccggggatgggagatggttggctgcttccagtttcggcgggaaggtttctgtgagggac
acaaagaccggggcagaagtatggcggcacatggcgacacacgggtcgcatgttgaggtc
ttgggctggctagaagatggaaagcggatgttttctgtggatgacaatttcaatattgtc
atttggaggtgggataatgtggagagggtgcaggaggaggaagaggaagtcgacaaggtc
aacaaggaaaggcgaaaattcacggctgttgcgtggtcaagcgatgacatatgtgctact
gtggttggagacggagacgtagtgatgtacgatgtgaagacggggaagaagatgtggggg
gatgctgagacacacgtaagccctgtgcattgtctgaagatgtctagagatagcaagcgg
gtgtttacggcagcagaagatggaaagtttgcgatgtgggacagcaagacgggcgacaag
ttgtgggaatgcggggaagaccgggccaaggataagtacgcagcagcagaagcatgttgg
tccaatgatgggacgagggtgttcgtgtcgtttggaaggagggtggggttgtgggacggg
aagactgggaacaagttatgggagagaatcgcagacgcctacatacacatcaggtgcatg
gcgtgggctggaaacgacacgaagatcgcgcttggcggtagcgctaacgagggcagggtc
gtgctgttaagcgccagaacgggagaggcgatcagggtggcatgtgggcatacagatggc
ggggtcgtgctgcggggcgccaaaacaggagagacgatgggcgatgcccccgaacgtgtc
ccagattcggtcggcctgaaatgggctgcggaccaaggtctgcttgagttgtattcagac
gaatttgcagacgaagttcacatagattggttcaactttgtgaagcggccctggagagaa
ggtgaagaaggtgtgcgggcttcgttctctgttgagcgggctccgttctctgttgggcgg
gctctgttccctgataatggttctcctgttgcggtgaagtggtctccagatgacaagtgg
atcgcgtcaactggatataatatggttgaaattgatgaaaatgggaaaccaagcagagtc
ggagttatgatctggaattgggagacaggtgtaacatatcggtaccagtgccagctcgag
agatattataaggatggtttaccacgctatccgctggaatggtctgacgacggacgacgc
gtagcccttggaattggacgacgcgtagcccttggaattggagaagaggtgatgttaagg
tatagcacaaagagtgaagttctaatgcagattgcttggttccgggacgggtcgcgaata
gcgacgttgggggtcgcgaatagcgacgttgggtgcaaggttaggtggaggaacgttgcg
aatcctgtccgtgacaagtcaaagcgctgtctgcgaaaagcaatacgatga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (53)   

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