KEGG   Corvus cornix (hooded crow): 104683327
Entry
104683327         CDS       T03546                                 
Symbol
USP19
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 19 isoform X1
  KO
K11847  ubiquitin carboxyl-terminal hydrolase 19 [EC:3.4.19.12]
Organism
ccw  Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ccw01002]
    104683327 (USP19)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccw04121]
    104683327 (USP19)
Enzymes [BR:ccw01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     104683327 (USP19)
Peptidases and inhibitors [BR:ccw01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   104683327 (USP19)
Ubiquitin system [BR:ccw04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    104683327 (USP19)
SSDB
Motif
Pfam: UCH USP19_linker UCH_1 CS zf-MYND USP7_C2
Other DBs
NCBI-GeneID: 104683327
NCBI-ProteinID: XP_039415259
Position
12:11670988..11691936
AA seq 1403 aa
MSSSTNAPGQRRVSRGLDDATNKKKQKDRANQESKEVSCPELEQAETAQEKDSEEELLLD
WKQNADEIIIKLNLGSGALKAEDVDAAFTDTDCVVKLPDGRQWSCQFYEEIESSCSKVQC
KKGNFLQLVLQKKIPLHNWSSLLKKRKDGSKELAKGAACWENGKEKAASAELTPEEPRAE
GTEPPRSRREPSNPKRAPGRSEALGGKSPASPGTQSGPSAKRAVYLKVAPTEEELNARVT
GNTEPSKGHSGRAGSRRNVRASQVDAPAALADLSLPLEKAVVLAKETVPVEMPPLAATTE
VFPHRVAACVEKRVLQPGSPAEALRSRDCLPVLGESSKAIPVGTPPMGRDGEKRDWSKDD
VALEAAADEPEPFVSLTFVKNDSYEKGNDLVVVHVYVKEIHKETSKVLFREQDFTLVFQT
SDMNFLRLHPGCGPHTVFRWQVKLRNLIEPDQCTYNFTVSRIDVCLKKRQSQRWGGLEAP
ATRGAVGGAKVAMPTGPTPLDKNPPGSNQHPLSSKEEARTSDKEKPRVEDGALDGVAART
APEHVAVKQEPHIPSPKPTCMVPPMTHSPVSAESVEDDEDEDEKKKVCLPGFTGLVNLGN
TCFMNSVIQSLSNTRELRDYFHDRSFESEINYNNPLGTGGRLAIGFAMLLRALWKGTHHA
FQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTETVDSDGRPDE
VVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCSKVSITFDPFLYLPVPLPQKQKVLT
VYYFAKEPHKKPVKFLVSISKENSSAMEVLDSVAHSVRVKPENLRLAEVIKNHFHRMFLP
SNSLDTVSPTDLLLCFEVLSPELAKERVVELQVQQRPQVPSGPVAKCAACQKKQLPEDEK
LKRCTRCYRVGYCNVACQKTHWPDHKASCRPENIGFPFLISVPESRLTYARLAQLLEGYA
RYSVSVFQPPFQLGRMSPEQGLQPLHSDKLEPLAKSSCAAATSTPELGDGDRASSLLQEP
PLSPAGPELHPETGDTTTVRSKVLTARSSLLSLDSGFSEHMESQDDSCCEKEPSYERALK
PEAAIPGYQHTPDSLNARATQFYITKIDAANREHKLEDKGDTPLDLTDDCSLALVWKNNE
RLKEFVLVESKELECVEDPGSASEAARAGHFTLEQCLNLFTKPEVLAPEEAWYCPKCKQH
REASKQLMLWRLPNVLIIQLKRFSFRSFIWRDKINDMVDFPVRSLDLSKFCIGRKGEQQL
PMYDLYAVINHYGGMIGGHYTAYARLPNDKNSQRSDVGWRLFDDSTVTTVDESQVVTRYA
YVLFYRRRNSPVERPLPGHPSDHRTERTPSAEAAASQGLPPVPFGSGLAPEGASPLAAEG
LPERFASPAERPAPSYSSMEEVD
NT seq 4212 nt   +upstreamnt  +downstreamnt
atgtccagcagcacaaatgcccctggccagaggagagtgtctcggggcttggatgatgct
accaacaagaagaagcagaaggatcgagccaatcaggaaagcaaggaagtgtcttgccct
gagctcgagcaggctgagactgcccaggagaaggactcagaggaggagctgctgctagac
tggaagcagaatgccgatgagatcattatcaagttgaacttgggcagtggagctctgaag
gcggaggacgtagatgctgctttcactgacacagactgtgtggtcaaactaccagacggg
cgccagtggagctgtcagttctatgaggagatcgagagctcctgcagcaaggtccagtgc
aagaagggcaactttctacagcttgtgcttcagaagaagatcccactccataactggtct
tcacttctgaagaaaaggaaagacggatccaaagaactggccaaaggggccgcatgctgg
gaaaatgggaaagagaaagctgcttctgcggagttgacccctgaagagccaagggctgaa
ggcacagagccaccaagatcccggcgggagccctccaaccccaagcgtgctccgggaaga
agtgaggccctgggagggaaaagcccagccagcccagggacacagagtggccccagcgcc
aagcgggcagtatacctcaaagtggctcccactgaagaggagctgaatgccagagtcacc
gggaacacggagcccagcaaagggcacagcgggagggccggtagccgccgcaacgtcaga
gccagccaggtcgatgcacccgcggcccttgcagacctctcactgcccctggagaaggct
gtggttttggccaaggagactgttccagtggagatgccacctcttgcagctaccacggag
gtgttcccccaccgtgttgccgcctgtgttgagaagagagtcctgcagcccggcagccct
gctgaggccttgcggagccgggactgtctgcctgtcttgggagagagctctaaggccatc
ccagtgggcacccctcccatgggcagagatggtgagaagagggactggtccaaggatgat
gtggctctggaagcagcagctgatgagccagaaccttttgtaagcctgacctttgtcaag
aatgactcatacgagaagggcaatgatctggtggtggtgcatgtctatgtgaaggagatc
cacaaggagacatccaaggtgttgttccgggagcaagacttcacgctcgtgtttcagacg
agtgatatgaacttccttcgtctccatcctggctgtgggccccacacggtgttccggtgg
caggtgaagctcaggaacctcattgagccagaccagtgcacgtacaacttcacggtgtct
cgcattgatgtctgcctgaagaaacgccagagccagcgctggggagggctggaggctcca
gccacacgaggtgcagtgggtggtgcaaaggttgccatgcctacaggccctacccctctg
gataagaaccctccgggcagtaaccagcaccccctctccagcaaggaagaggcccgaacc
agtgacaaagagaagccgcgtgtggaagatggggctctggatggcgtggcagcccgtacg
gccccagagcacgtggcagtgaagcaagagccacatattccttcgcccaaaccgacgtgt
atggtgccaccaatgacacacagcccagtgagtgctgagagtgtggaggatgatgaggat
gaggatgagaagaagaaggtctgcctgcctggcttcacagggctggtgaacctgggcaac
acctgcttcatgaacagtgtcattcagtccctgtccaacacccgggagctgcgtgactac
ttccatgatcggtcctttgagtcagaaatcaactacaacaacccgctggggacgggcggg
cgcctggccatcggcttcgccatgctgctcagagcactgtggaagggcacacaccacgcc
ttccagccctctaaactgaaggcaattgtagccagcaaggccagccagttcactggctat
gcccagcatgatgctcaggagttcatggccttcctgcttgatggcctgcatgaggacctc
aaccgcatccagaacaagccctacacagagactgttgactcggatgggaggcctgatgag
gtggtagctgaggaggcttggcaacgacacaagatgaggaacgactcgttcatagtagac
ctcttccagggccagtacaaatccaagcttgtgtgcccggtgtgctccaaggtgtctatt
acatttgaccccttcctgtacctccctgtgcccctcccacagaagcaaaaggtgctgact
gtctactattttgcaaaggagccacacaagaaaccagtcaagtttctcgtgagtatcagc
aaggagaactccagtgccatggaggtacttgactcagtggcccacagcgtgcgcgtgaaa
ccagagaacctgcgcctggcagaggtgatcaagaatcacttccaccgcatgttcctgccg
tctaactcgctagacacggtctcgccgacggacctgctgctttgctttgaggtgctgtcc
ccagagctggccaaggagcgcgtggtggagcttcaggtccagcagcgcccgcaggtgccc
agtggccctgttgccaagtgtgcggcctgccagaagaagcagctgccagaggatgagaag
ctcaagcgctgcacgagatgctatcgagtcggttactgcaacgtggcatgtcagaaaaca
cactggccagaccacaaggcttcatgccgtcccgagaacattggtttccccttcctcatc
agcgtgcccgagtcccgcctcacctacgcccgcctggcccagctgctggagggctatgca
aggtactcagtcagcgtgttccagcctccattccagttgggccggatgtcaccagagcag
gggctgcagcctctgcactcagacaagctggagcccctggccaagagcagctgtgcagca
gccacctccacccctgagctgggagatggggacagggcttccagcctcctgcaggagccc
ccactctcaccagctgggcctgagctgcacccagagacgggggatactaccactgtccgg
agcaaggtcctgacagccaggagttccctgctgagcttggattcagggttctctgagcac
atggagtcgcaggatgacagctgttgtgagaaagagccgtcctatgagagagctctcaag
ccagaagctgccatccctgggtaccagcacactccagactcactgaatgcccgcgccaca
cagttctacatcactaagatcgacgctgccaaccgagagcacaagctggaagataaaggt
gacacccccctggatctgacagatgactgctcccttgccctggtgtggaagaacaatgag
cgcctcaaggaattcgtgttggtagaatccaaggagttggagtgtgtggaggacccaggc
tcagccagcgaagcagcccgggctggccacttcaccctggagcagtgcctcaatctcttc
accaagcccgaagtcctggccccagaggaagcatggtactgccccaagtgcaagcagcac
cgtgaggcttccaagcagctgatgttatggcggctgcccaacgtcctcatcatccagctc
aagcgcttctccttccgcagctttatttggagggacaagatcaatgacatggtggacttt
cccgtccggagcctggacctgagcaaattctgcattggtcggaagggtgagcagcagctg
cctatgtatgacctgtacgctgtgatcaaccactatggaggcatgattggagggcactac
acagcgtacgcccgcctgcccaacgacaagaacagccaacgcagcgacgtaggctggcgg
ctctttgacgacagcacagtcaccacggtggatgagagccaggtggtgaccagatatgca
tatgtcctcttctaccgccggaggaactctcctgtggagagacccctgccagggcatccc
tcagaccaccgcaccgagcgcaccccctctgctgaagccgctgcaagccagggactgccc
ccggtgccgttcggatctggcctggcccccgaaggagcctcgccgctggctgcggaaggc
ctccctgagcgtttcgccagccccgccgagcgcccagccccctcctacagcagcatggaa
gaagtcgactag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (41)   
   KEGG ORTHOLOGY (1)   
   RefGene (37)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (9)   
   RefSeq(nuc) (9)   
Protein domain (6)   
   Pfam (6)   
All databases (64)   

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