KEGG   Corvus cornix (hooded crow): 104684109
Entry
104684109         CDS       T03546                                 
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc isoform X1
  KO
K10357  myosin V
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    104684109 (MYO5C)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccw03019]
    104684109 (MYO5C)
   04131 Membrane trafficking [BR:ccw04131]
    104684109 (MYO5C)
   03029 Mitochondrial biogenesis [BR:ccw03029]
    104684109 (MYO5C)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ccw04812]
    104684109 (MYO5C)
Messenger RNA biogenesis [BR:ccw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Cargo complex
     104684109 (MYO5C)
   mRNA cycle factors
    P-body specific factors
     104684109 (MYO5C)
Membrane trafficking [BR:ccw04131]
 Others
  Actin-binding proteins
   Myosins
    104684109 (MYO5C)
Mitochondrial biogenesis [BR:ccw03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Retention of mitochondria
    104684109 (MYO5C)
Cytoskeleton proteins [BR:ccw04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Myosins
     104684109 (MYO5C)
SSDB
Motif
Pfam: Myosin_head DIL IQ Myosin_N AAA_22 AAA_16 Rnk_N
Other DBs
NCBI-GeneID: 104684109
NCBI-ProteinID: XP_039413358
Position
10:995195..1028622
AA seq 1736 aa
MALAELYAQYNRVWIPDNKEVWQSAEITKSYKAGDRFLHVQLEDGTELNYPVDPAPLPPL
RNPDILVGENDLTALSYLHEPAVLHNLKIRFVESKLIYTYSGIILVAINPYKELPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYTMRYFAT
VSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDQSYQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAMQPEYEHLKLGNAEEFNYTRMGGSTVIEGVDDR
ANMVETQKTFALLGLKGDFQMDVFKMLAAILHLGNVEIAAVGDERSSISMEDKHLRIFCE
LLDLNCDKMARWLCHRKIVTTSETVIKPMTRAQAVNARDALAKKIYSHLFDFIVERINQA
LQFPGKKHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGKDENWLQKLYNNFVNKNTLFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVHEVLIEILKESKFHLCANFFQDSPVSVSPF
SSSINIKSARPVLKSPNKQLRTTVGSKFRNSLSLLMVTLNATTPHYVRCIKPNDEKLPFE
FDSKRVAQQLRACGVLETIRISAQSYPSRWTYIEFFSRYSILMTQQELSINDKKQICKIV
LQRLIQDHNQYQFGRTKIFFRAGQVAYLEKLRSDKLRHACILIQKCVRGWLQRKKFLSMR
KAVVTVQQYFRGQRTVRQAVTARNLKETWAAIIIQKYCRGYLVRRLCQLIHVAAVTIQAY
TRGFLARKKYQKMREEQKAVILQKYARAWLARRRFQNIRCFVLNIQLSYRVQQLQKKIEE
QSRENHGLLERLTSLASAHMNDVDTIQKLESELEKFAAQKRTYEEKGKKYREDSEQKILE
LENQNKELQEQKETLEIKLQEKTEEMKEKMDDLTQQLFNDVQKEENQRMILEKNFQNQKQ
DYEKEIELLKGEIKILKEEKTQLQQQIQQEIIIQDGLKMEVGQLTKQAQKIPELQKEIEL
LQTQKLDVEKQAHSQKRELREKMSEVTKQLLESYDFEDVRSRLSTEDLEHLNEDGELWFA
YEGLKKATRVMESHFQSQKEIYEKEIEGLNFKVEHLSQDINHLQKLFREENDINDGIRLE
VSRLTSENLVIPDLKQQVAELENQKLDLENRLQEQTVKLKEMSNRLHYELERDRTHRRTT
EAQNEVDTKENESLKGTTQGTEGLSNGLMQDEVQDEVQSKIKQVTTRLAVENMDLEEKLD
MKDRIIKKLEDQIKTLTKTIEKAETHVPTVPKEYIGMMEYKKEDEERIIQNLILDLKPRG
VVVNMIPGLPAHILFMCVRYADYLNDADMLKSFMNVTIDGIKQVVKEHSEDFEMLSFWLS
NTYHFLNCLKQYSGEEEFTKLNTPRQNQNCLKHFDLSEYRQILSDLAIRIYHQFILVMEN
SIQHMIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDTYTMTSILQQLSYFYSTMCQNG
LDSELLKQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDKNLQSSN
AKETLEPLSQAAWLLQVKKITDDDAKEICEHCTSLSTVQIVKILNSYTPIDDFEKRVTPS
FVRKVQALLNNREDVPQLMLDTKYLFQVTFPFTPSPHALELIQVPSSFKLGFLTRV
NT seq 5211 nt   +upstreamnt  +downstreamnt
atggcgctggccgagctctacgcgcagtacaatagggtttggatccctgataacaaagaa
gtttggcagtctgcagaaatcacaaaaagctacaaagctggagaccgttttctccatgtg
cagttagaagatggaactgaactgaattaccctgttgatccagctcctttgccaccacta
cgaaatcctgacatccttgttggtgaaaatgatctcactgccctcagttatctccatgaa
ccagctgttctacacaatcttaaaattcgttttgtggagtctaagcttatctacacatac
agtggaataattttggttgcaataaacccctacaaggagctgccaatttatggagatgca
attatccatgcatatagtgggcaaaacatgggggacatggatccacacatatttgctgtg
gcagaagaagcatacaagcaaatggcaagaaataacaaaaatcagtctattatagtcagt
ggagaatcaggagctggaaagactgtgtctgcaaggtatactatgagatactttgccact
gtgagtaagtcaagcagcaatgcacatgtggaggataaagtattggcatccaatccaata
acagaggctgtgggcaatgcaaaaaccactcggaatgataacagcagtcgatttggaaaa
tacactgaaatcagttttgaccagagttaccaaatcattggagctaacatgagaacatac
ctgcttgagaaatccagagttgtctttcagtcagagaatgaaaggaactaccacatattt
tatcagttgtgtgcatctgctatgcaacctgaatatgagcatcttaaattgggaaatgca
gaagaatttaactacacacgaatgggtggcagcactgtaatagaaggagttgatgacaga
gcaaatatggtggagactcagaagacgtttgccttactgggtctgaagggggattttcag
atggatgtttttaaaatgctggcagcaatcctgcacttgggcaatgtggaaatagcagct
gttggagatgagagatcatccatcagtatggaagataaacatctcaggatcttctgtgag
cttctggatttaaactgtgacaaaatggcccggtggttgtgccacagaaagattgtcacg
acctcagagacggtgataaagccgatgacgagggcccaggctgtcaatgccagggatgct
ctggcaaagaagatctactctcatttatttgacttcattgtggaaagaattaaccaagct
ctgcagttccctggcaaaaaacacactttcattggtgttttggatatttatgggtttgaa
acatttgatgtgaacagttttgaacaattttgtatcaattatgctaatgaaaaactacag
cagcaatttaacctgcatgtctttaaacttgaacaagaagagtacatgaaggaagatatt
ccatggactttaatagacttttatgacaaccagcctgtcattgaccttattgaagctaaa
atgggaattttggaacttctggatgaagaatgcttgttgcctcatggaaaagatgaaaac
tggcttcaaaagctatataataattttgtcaataaaaacacgctctttgaaaagccaagg
atgtcaaacacttctttcatcattcagcactttgctgataaggtagaatataaatgtgaa
ggatttctggaaaaaaacagagatacagtacacgaagtattgattgaaatcttgaaagag
agcaagtttcatctgtgtgcaaatttttttcaagacagtccagtgtccgtttcacctttc
agttcctctataaacatcaaatctgccagacctgttctgaaatcacccaacaaacagctc
cggacaactgtgggcagtaagttccggaactctttgtctttacttatggtgaccctcaat
gcaaccactcctcattatgtgagatgcataaagccaaacgatgagaagttgccttttgag
tttgattccaaaagagtggctcagcagctgcgagcatgtggtgttttggaaacgattcgg
attagtgcacagagctacccatccaggtggacttacatagagtttttcagccgttacagc
attcttatgacacagcaggaactctccataaatgacaagaaacagatttgcaagattgtt
ttgcagcggctgatccaggatcataaccagtatcagtttgggagaacaaaaatttttttc
agagcaggacaggttgcttacttagagaaactgcgctcagacaagctgagacacgcgtgc
atcctgatccagaagtgtgtccggggctggctgcagaggaagaagttcctgagcatgagg
aaagcagtggtcacggtgcagcagtacttccgtgggcagcgcacagtgaggcaagctgta
actgcaagaaatctgaaggaaacatgggcagctataattattcagaagtactgtcggggt
tacctggtccgcagactttgccagctcattcatgtggctgctgtgacaatacaagcttac
acaagaggatttctagcaagaaaaaagtatcagaagatgcgtgaagagcagaaggctgtg
atcctccagaaatacgcccgtgcatggcttgccaggcgcagattccagaacattcggtgc
tttgtgttgaatatccagctgtcatacagagttcagcagctgcagaagaagatagaggaa
cagagtagagaaaatcatggtttgctggaacgattgaccagtctggcttcagctcatatg
aatgacgtggatacaattcagaaacttgaatcagaactcgaaaaattcgctgctcaaaag
agaacatatgaagagaaagggaaaaaatatcgagaggacagtgagcagaaaatcttagaa
cttgagaatcagaataaagaattacaagaacagaaggagactttagaaataaagctccaa
gaaaaaactgaggaaatgaaagagaaaatggatgacctcacacagcaactcttcaatgat
gtacaaaaagaagaaaaccagcgaatgatacttgagaaaaatttccaaaaccagaagcag
gactatgaaaaggagattgaattgctcaagggagaaattaagattctgaaagaagaaaaa
actcagctacagcaacaaattcagcaagaaattatcattcaggatggcttgaaaatggaa
gtaggacagcttacaaaacaagcacagaaaatccctgagttgcaaaaggaaatcgaactt
cttcagacacaaaaactggatgttgaaaagcaggcccactcacagaagcgagagctgagg
gaaaagatgtcagaagttaccaagcagcttcttgaaagttatgattttgaagatgtaaga
agcagactctctacagaggatctggaacacttaaatgaggatggagaactgtggtttgct
tacgagggcttgaaaaaagccacaagagtaatggaaagccatttccagtctcagaaagaa
atatatgagaaggagattgaaggtttgaactttaaagttgaacatcttagtcaagatatt
aatcatctacagaaattattccgagaggaaaatgacataaatgatggcattcggcttgaa
gttagcaggctaacctcagaaaatctggtaatcccagatcttaagcagcaagttgctgaa
cttgaaaatcaaaaattagatcttgaaaaccgtcttcaagagcagactgtaaagttgaaa
gagatgtcaaatcggctgcattatgagctggaacgggataggacacacagacgaactact
gaggctcagaatgaagtcgatacaaaagaaaatgagagtctgaaaggcacaacccaagga
actgaggggctgagcaatggtttgatgcaagatgaagtccaggatgaagtacaaagcaag
ataaagcaagtgacaactcgacttgctgtggaaaacatggatcttgaagaaaaactagac
atgaaagacagaataataaaaaaattagaggatcagatcaaaactctgaccaagactatt
gaaaaagctgaaacccatgtgccaactgtgcccaaagaatacattggaatgatggagtac
aagaaggaggatgaagaaaggatcattcaaaatctgatcctcgatttgaagccacgtgga
gttgtagttaatatgatacctggccttccagctcacatcctgttcatgtgtgtgaggtat
gcagattacctgaacgatgctgacatgctgaagtctttcatgaatgtaaccattgatggt
atcaagcaggttgttaaggaacattcagaagactttgagatgttgtccttttggctttcc
aatacatatcattttcttaactgtttgaagcagtacagcggggaagaggaattcacgaag
cttaacactccacgtcagaatcagaactgtctgaagcattttgatctctcagaatacaga
caaattctcagcgatctggccattcgaatatatcaccagttcattcttgtaatggagaac
agcattcagcacatgattgtaccaggcatgctggagtatgaaagtcttcaaggaatttct
ggcttgaaacctacggggttccgtaaacgttcttctagtatagatgacacggatacctac
acaatgacctctatcctgcagcagctcagctatttttatagcactatgtgtcagaatggc
ttggactctgagctcctaaagcaggcagtgaagcagcttttctttctgattggagctgtc
accctcaatagtctcttcctccgtaaggacatgtgctcctgtagaaaaggaatgcagata
agatgtaatatcagctacttggaagaatggctgaaggacaagaatcttcaaagcagcaat
gccaaagaaactttggagcccctgtctcaagcagcctggctccttcaggttaaaaagatc
acagatgatgatgccaaggaaatatgtgaacactgcacatctctttctactgtgcagata
gttaagatcctgaactcctacactccgatagatgactttgagaaaagagtgactccatca
tttgttcggaaagtccaggctctgctgaacaaccgtgaggacgttccacagctgatgctg
gataccaagtatctctttcaagtgacgtttcctttcaccccctctccacatgccttggaa
ctgatacaagtccccagcagcttcaagcttggctttctcacaagggtttaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (58)   
   KEGG ORTHOLOGY (1)   
   RefGene (54)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (7)   
   Pfam (7)   
All databases (80)   

Download RDF
DBGET integrated database retrieval system