KEGG   Corvus cornix (hooded crow): 104686143
Entry
104686143         CDS       T03546                                 
Symbol
MID1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X2
  KO
K08285  midline 1 [EC:2.3.2.27]
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104686143 (MID1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccw04121]
    104686143 (MID1)
Enzymes [BR:ccw01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104686143 (MID1)
Ubiquitin system [BR:ccw04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    104686143 (MID1)
SSDB
Motif
Pfam: COS SPRY zf-B_box fn3 zf-RING_UBOX PRY zf-C3HC4_4 zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 Pur_ac_phosph_N zf-RING_2 zf-RING_5 Baculo_PEP_C
Other DBs
NCBI-GeneID: 104686143
NCBI-ProteinID: XP_010392684
Position
1:complement(98409829..98560157)
AA seq 667 aa
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESITAFQCPTCR
YVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDNNSMSSCEKVLCQ
FCDQDPAQEAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSDRYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQETKLMEECDQLIEIIQQRRQIIGTKIKEGKVVRLRKLAQQIA
NCKQCIERSTSLISQAEQSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFTREKKLLECLDYLTAPNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFIVKAINQAGSRSSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDETSSKKSHTPERFTSQGSYGVAGNVFIDSGR
HYWEVVISGSTWYAIGISYKSAPKHEWIGKNSASWVLCRCNNTWVVRHNSKEIPIEPAPH
LRRVGILLDYDNGSLAFYDALNSLHLYTFDITFGQPVCPTFTVWNKCLTIITGLPIPDHL
DSSEQLA
NT seq 2004 nt   +upstreamnt  +downstreamnt
atggaaacactggagtcagaactgacctgccctatctgtctagagctgtttgaagacccg
ctgctgctgccttgcgctcacagcctctgcttcaactgcgcgcaccgcatcctggtctcc
cactgcgccaccaacgagccagtggagtctatcaccgccttccagtgcccgacctgccgc
tatgtcatcaccctcagccagcgcggtctagacgggctcaagcgcaacgtcaccctgcag
aacatcattgacaggtttcagaaagcctcagtcagtgggcccaattcccccagcgagacc
cgccgggagcgggcgttcgataacaacagcatgtcgtcctgcgagaaggtcctctgccag
ttctgcgaccaggaccctgcccaggaggcggtgaaaacctgcgttacctgcgaggtgtcc
tactgcgaggagtgcctgaaagccactcaccccaataagaagccattcaccggccaccgt
ctcatcgagcccatcccggactctcacatcaggggattaatgtgcttggagcatgaggac
gagaaagttaacatgtactgtgtgactgatgaccagttaatttgtgccttgtgtaaactg
gtcgggcgacaccgtgaccatcaggtggcagctttaagtgaccgctatgacaagctaaag
caaaatttggagagtaacctcaccaaccttattaagaggaacactgaactggaaactctt
ctggcaaaactcattcagacctgtcaacatgtagaagtaaatgcctcccgccaagaaacc
aagctaatggaagaatgtgaccaactcattgaaataatccagcaaagacgacaaataatt
ggaaccaaaatcaaggaaggaaaggtggtgaggttgagaaaactggctcagcagattgca
aactgcaaacagtgcatcgagcgctcgacatccctcatctctcaggctgagcagtcgctg
aaggagaatgatcacgctcgcttcctgcaaacagctaaaaacatcactgaaagggtttcc
atggcaactgcatcctcccaggttctaattcctgaaattaatctcaacgatacttttgat
actttcgcactcgattttaccagggagaagaaattgttggaatgccttgattaccttaca
gctcccaacccacccaccattcgagaagagctctgtacagcttcttatgataccattact
gtgcactggacatcagatgatgagttcagtgtagtctcttacgagctgcagtacaccatc
ttcactggacaagccaacgttgttagtttatgcaactcagccgacagctggatgattgtt
cctaatatcaaacaaaaccactacacagtgcatgggctgcagagtggcacaaagtacatc
ttcattgttaaggccattaatcaggctggcagccggagcagcgagcctggcaagctcaag
acaaacagtcagccatttaaactggaccccaaatctgcccatagaaaattgaaagtgtct
catgataacttgacagtggaacgggatgaaacatcatccaaaaagagtcacacaccagag
agattcacgagccaagggagctacggagtagctggcaacgtgttcatcgacagcgggcgg
cattactgggaagtggttataagtgggagtacgtggtatgctattggtatttcctacaag
tcagcaccgaagcatgagtggattggaaagaattctgcctcctgggtgctttgccgctgc
aataacacgtgggtggtgcggcacaacagcaaagaaatccccatcgagcccgcgcctcac
ctccggcgggtcgggattttgctggactacgacaacggttcccttgccttttatgatgct
ttgaactccctacacctttacacttttgacattacatttggccagccagtgtgccccacg
ttcacagtgtggaataaatgtttgaccattataactggcttgcctatccctgaccaccta
gactcctccgagcagctcgcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (14)   
   Pfam (14)   
All databases (39)   

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