KEGG   Corvus cornix (hooded crow): 104686477
Entry
104686477         CDS       T03546                                 
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC104686477
  KO
K09228  KRAB domain-containing zinc finger protein
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    104686477
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ccw03000]
    104686477
Transcription factors [BR:ccw03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    104686477
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 zf-C2H2_4 KRAB HVO_2753_ZBP zf-C2H2_6 C1_4 ATG16 Zn-ribbon_8
Other DBs
NCBI-GeneID: 104686477
NCBI-ProteinID: XP_039405252
Position
2:complement(773032..803709)
AA seq 2558 aa
MGLGRRSGAPHAEPPEEVGLPGSSGELLFPGTGFGTPEGQGGGARGGGSAGAAQTGQSSG
PRAGPGADAGASPRRRRAPAEERPHGCAECGKSFSGKKSLRIHQRSHAAERPYPCAECGK
SFNCHSGLVRHQMIHRGERPYKCSECRKCYSRKEHLQNHQRLHTGERPFACAQCGKSFIR
KQNLLKHQRIHTGERPYQCPACGRSFRYKESLKDHQRVPRRRGGAAAAAAARDPAPRGLG
AAPPRTGTPRDGDSHRPRSFRPNLGARPGRGARGSPGGTRAPRSPATDGHFRPQRSPHGQ
CRRTGWGAAPRRVPPRHPRLPLSPLAPAAYFYCPPRAVPLYSAWGVVLYGRSDIRVNPEP
FLRHPGGPKLGVTILLGGHNQSWVVNPTGLAPSRRAVTRVPRGHSGVTSGPSRASHARGT
GGHLPGALRARGSRGSAGRPRPPSLPAGIRVPPASPHTVPRGGRGHSCPWRGGSRPSLAV
GEEEASVSGSGAARPARGAGPGRGCRRGSGWARRCLPRRRSGRRLGEAGLGFGLLEERAG
VAAGLGGRRGRALAGGGALLAQVAQLVADVREDAEQAELQLPVARPLLALGGPFLLPHGQ
LLVVQLVPLLLQVEQVMDASPPALAAVLAQAGAAQPAGGAGAAGASPGGEAEEGSDSSVR
APLQRGAGRGSSSAGAFSQVGPISTLGKAPISGPGPPACSSGCAESSPRPRAGRSDTPSC
PQSEASDPYRALKCRTTFQTSVSVSSLEKLAFLFRPDAGIACEAAAEVEGAQLNLGPHSS
LSAPGGNMGLREPEGAAEEGAEARAPEPEAPGSPQPAATGAADRDVAVLRVRTTKAWKRS
GEVAWHSRYRRSVARLLQTSRSEGQGGTAASSPASSPSASPRPHPPPAGSPSRSSCSRLS
RPGAEVRDTASALASGAAWPGLSPTARSGTFSEPLALAQSSSVSRSPLLSPLPGRRPGAA
QRSPRSEDSRRARSCGGGPGSTAPAQCSAVGCSASPFSAGGFLPARPWRAPRRASQPPQG
SGSGRASAPARSAARAPSTQRSSAASSAASFPSRLRFRSGSPLRCHSLRMRSLFLMMRQI
WGCDTPKRLASSLCDTLGPSNISSTRNLLGHDRNARTGAATAPGASPKSTGCWRSSFMAP
APSRSSGNAAAAAAGAAPAEASPARGMAVIERCRTGMTARGRAAGRGVSGARGAGGGAAE
PRWAAVALPHLSPSPPARSVPPGAAAAAAPRGPATGGGNAPHGLRARSRSHRRAPGAFPP
QELESMMEPQELGLEQPLPAPEQGPGGEAELPAAEISLTLVTEIQAVDRKVDTQAAQLMN
LEGRMRMAETKLIGCEKTAVEFGNQLESKWTALGTLIQEYGQLQKRLENMENLLKNRNFW
ILRLPPGAKGEVPKVPVAFNDASFNFSEEEWKSLNEWQKELYRHIMKGNYEAVISMDAAI
SKPELLTRIEQGEDPNAEDQEDSEGGETPTDPSTEFFFPGPDDSSWGKYEETLAESHEGS
EEEEGVEVPGTYEQPCDEEGSESLELSRSLTGKWEEVFSSPEEEMQSSSKSQSGSAPPQR
TATGNGLRRSVRRGRDLARKDPEEAAADKGPYICCECGESFLDKQLFATHQKAHASEEAC
TSLEHSEGFRQKSKAKGQGPSRSKASKRPDGEKSSGFKYGFVRHQVNNMVERPYTCSQCK
ESFSLEVSLILHQKLHTGKGDGPLTCTYCGKDFRDLSKAIRHQRIHTGERPYQCTECGKS
FIRRDHLLKHWRVHTGETPYQCPVCGKHFRYKESLNCHQKIHSRNPRPGEDSQHNLGSAG
TQTDHFCMKKETKQYAPRSPQSPPVPAAGGAVGGPRRGGALMPSARQGALRRAAPRPARC
PAAGGGEAASGRWILPAAAPGAPGTEQRAMAEGAPAQAPEPVRPPRCPSPLRPAAGPERT
SERETQTAELSLTVVAAVQAVERKVDSHSTRLLDLEGRTGMAEKKLIDCEKTAAELGNQL
ESKCAALGTLIQEYGLLQRRLENMENLLKNRNFWILRLPPGRKGEVPKVPVTFDDVSVYF
NDKEWEKLEEWQKELYKNVMKGNYESLISLDYAISKPGVLSQIEQGEESRGRNEQDLEES
EIITDATAAGIRVVIKTEELLPEDSPENPELHGMSGQSEGSFQSPDEEAACESPYGSVSP
PRDLPGTSLGDSSEYGADFNEIQRVIVHHGSCTEDGIVIKTEEEEEEEEDDPDTLEPCAM
FSGRSEPPAFPSHEAGLGCEAQCSSKAQPRGLAARVRKPSACERDSGDMKPASGQQRNRT
RERPYICPECGKSFMLKINFMIHQRNHLKEGPYECHECDLSFRNKQQFLLHQRSHTRRGV
GVPRRPEHGLKPPSRPPPPGKPYKCSECESSFSHKSSLSKHQITHVGERPFTCGECRRSF
RLQISLLMHQRIHAGKNEMAFLCPQCGKNFTRPSHLLRHQRTHTGERPYQCSQCEKTFSE
KSKLTNHYRIHTRERPHACAVCGKGFIRKHHLLEHQRIHTGERPYHCTECGKNFTQKHHL
LEHQRAHTGERPYPCTECTKCFRYKQSLKYHLRTHMGE
NT seq 7677 nt   +upstreamnt  +downstreamnt
atggggctgggacggaggagcggtgccccccacgccgagccccccgaggaggtgggtttg
ccgggcagctccggggagctgctcttccccggcacgggcttcgggacccccgagggacaa
ggcggcggtgcccgcggcggtggctctgccggcgcagcacagactgggcaaagctccggg
ccccgagccgggcccggggccgatgccggggcgtccccgcggcgccgccgggcccccgcc
gaggagcggccgcacggctgcgccgagtgcggcaagagcttcagcggcaagaagagcctg
cggatccaccagcgcagccacgcggccgagcggccctacccgtgcgccgagtgcggcaag
agcttcaattgccactcggggctggtgcggcaccagatgatccaccgcggcgagcggccc
tacaagtgctccgagtgccggaagtgctacagccgcaaggaacacctgcagaaccaccag
cggctgcacaccggggagcgccccttcgcctgcgcccagtgcggcaagagcttcatccgc
aagcagaacctgctcaagcaccagcgcatccacaccggggagcgcccgtaccagtgcccc
gcctgcggccgcagcttccgctacaaggaatcgctcaaggatcaccagcgggttccacgg
cgccgaggcggggccgccgccgctgccgccgcccgggatcctgccccccggggactaggg
gccgccccgccgcggactggcaccccccgggacggggacagccaccggccacgcagcttc
cgaccaaatcttggtgcccggccggggcggggggcacgcgggagccccggggggacacga
gcccccaggtcccccgccacggacggacactttcgcccccagcgctccccccacggacag
tgtcgccgcacggggtggggggcagccccccgccgtgtccccccgcgccacccccgcctg
ccgctctctcccctcgcccccgctgcttatttttactgccccccccgcgccgtcccgctg
tacagtgcttggggtgtagttttgtatggacgaagcgatatccgtgtgaatccagagccc
ttcctcaggcaccccgggggccccaagctgggtgtcaccatcctcctgggaggccacaac
cagagctgggtagtaaatcctactggactagcgccgtcacgccgcgctgtcacacgtgtc
ccccgcgggcacagcggcgtcacctcggggccctcccgcgcctcccacgcgcgggggacg
ggcgggcacctgcccggagcgctgcgagcccgcggcagccggggcagcgccggccgcccg
cgtcccccgtcgcttcccgcggggatccgggtgccgcccgcgtcaccgcacaccgtcccc
cggggcggccgcgggcactcgtgtccttggcggggcggctcccgcccgtccctagctgtt
ggtgaggaagaggcgtctgtgtcgggaagcggagccgcgcggcccgcccgcggcgccggc
cccggccgcggttgccgaaggggctccggctgggcacggcggtgtctgcccaggcggcgc
tccggccggcggctcggggaagctgggctcggctttgggctgctcgaggagcgggctggg
gtcgcggcggggctcggggggcggcggggccgggctctggcgggcggcggcgcgctcctg
gcgcaggtagcgcagctcgtcgcggatgtccgtgaggacgccgagcaggcggaactgcag
ctcccggtcgcgcgcccgctcctcgcgctgggtggcccgttcctcctgccacatggccag
ctcctggtggtacagctggtcccactgctcctccaggtcgagcaggtgatggatgctagt
cctccagctctcgcggcggtcctcgcgcaggcgggagcagcccagcccgcgggcggggcc
ggggcggccggggcgtctcccggcggggaggcggaggagggcagcgattcctcggtcagg
gcgccgttgcagcggggagcgggccggggctcctcctccgccggggccttctcccaggtg
ggccccatcagtaccctgggcaaggcgcccatctccgggcccgggccccccgcctgctcc
tcgggatgcgccgagtcgagcccgcggcccagggcgggcaggtcggacacgccctcgtgc
ccccagtccgaggcctcggacccgtacagggcgctgaaatgccggaccacattccagacc
agcgtctcggtctcgtcattggagaagttggccttcctcttccggccagacgctggcatc
gcctgcgaggctgcggcagaggtggaaggggcacaattgaacctcggtccccactcctct
ctgtcagctcctggggggaacatggggctgcgggagcccgagggagccgcggaggaggga
gccgaagcaagagccccggagccagaggcacccgggagcccccagccagctgccacgggg
gccgcggacagggacgtggccgtgctgcgcgtcaggaccacgaaggcctggaagaggtcc
ggcgaggtggcctggcactccaggtaccgccgcagcgtggccaggctcctccagacctcc
cgctccgaggggcagggcggcacggccgccagctcgcccgcgtcctcgccctccgcatcc
cctcgtccccatccgcccccagccgggtccccgtcgcgctccagctgctcccggctgagc
aggccgggtgccgaagtgagggacacggcctcggcgctggcatcgggggcagcgtggccg
gggctgtcccccaccgcccgcagcggcaccttctccgagccgctggcgttggcgcagagc
agcagcgtcagccgctcgccgctgctctcgcccttgccgggccgccggccgggagcagca
cagcggtctccccgcagcgaagattctcggcgggcgcgtagctgcggaggaggcccgggc
agcaccgcgccggcccagtgctccgccgtgggctgctccgcgtcccctttctccgccggc
ggcttcttgccggcgaggccgtggcgagcgcccaggcgagccagccagccgccgcagggc
tcggggtcgggccgggccagcgccccggccaggtcggcggcgcgggccccctccacccag
cgcagcagcgcggcctccagcgccgcgtccttcccctcccgcttgcgcttccgctcgggg
tcgccgctgcggtgccactcgctcaggatgcgctccttgttcttgatgatgcggcagatc
tggggctgcgacaccccgaagcgcttggccagctcgctctgcgacaccttggggccctcc
aacatctccagcacccgcaaccttctcggccacgaccgcaacgccaggaccggtgccgcg
acggcccccggtgcctcacccaaatcgacgggatgctggcgatcctccttcatggcaccg
gcaccgtcccggtcctcgggaaacgcggcggcagctgctgccggtgctgctcccgccgag
gcctcaccagcgcgagggatggcggtgattgagcgatgccgcaccgggatgacggcgcgc
ggccgggcggcgggacgcggcgtcagcggtgcccgtggggccggtggcggggccgccgag
ccccggtgggccgcggtggccttgccacacctgtctccgtcccctcccgcccgctcggtc
ccgcccggcgccgccgccgccgccgccccgcgcggccccgctaccggcggcgggaacgcg
ccccacgggctgcgggcgcgttcccgctctcaccgccgtgcgcccggcgcgttccccccg
caggagctggagagcatgatggagccccaggagctgggcctggagcagccgctgcccgcc
cccgagcagggccccggcggcgaggccgagctgccggccgccgagatctcgctcacgctg
gtcaccgagatccaggccgtggacaggaaggtggacacccaggccgcccagctgatgaac
ctggagggcaggatgaggatggcggagactaagctgatcggctgcgagaagacggcggtg
gagttcgggaaccagctggagagcaagtggacggcgctgggcaccctcatccaggagtac
ggacagctgcagaagcgcctggagaacatggagaacctcctgaagaacaggaacttctgg
atcctgcggctgcccccgggggcgaaaggggaagtccccaaggtccccgtggccttcaat
gacgcctcgtttaacttctctgaggaggagtggaagagcctcaacgagtggcagaaggag
ctctacaggcacatcatgaaaggcaactacgaggccgtcatctccatggacgctgccatt
tccaagcctgagctgctgacacggatcgagcagggagaggatcccaacgctgaggatcag
gaggactcggagggaggggagacccccacggaccccagcactgagtttttcttccctggg
cccgatgacagctcgtggggtaaatatgaagagactctggctgaaagccacgaaggctct
gaggaagaggagggcgtggaggtccctggtacatacgaacagccgtgcgacgaggaaggc
tctgagagcctggagctttccaggtcgttgacaggaaagtgggaagaagttttctccagc
ccagaggaggagatgcagtcgagcagcaagagccagagcgggtcagccccgccgcagcga
acggcgacgggcaacgggctgaggcgctccgtgcgccgcgggagagacttggccaggaag
gatcccgaggaggcggcggcggacaaggggccctacatctgctgcgagtgcggggagagc
ttcctggacaagcagctcttcgccacccaccagaaggcgcacgccagcgaggaggcctgc
acgtccctggagcacagcgagggcttccggcagaaatccaaagcgaagggccagggcccc
tcccgctccaaagcgtccaagcgccccgacggagagaagagctcgggattcaagtacggc
ttcgtcaggcaccaggtgaacaacatggtggagaggccttacacctgctcccagtgcaag
gagagcttcagcctggaagtgagtctgatcctgcaccagaagctgcacacggggaagggc
gacgggccgctgacgtgcacctactgcgggaaggacttccgagacctctccaaagccatc
cgccaccagcgcatccacaccggggagaggccctaccagtgcaccgagtgcgggaagagc
ttcatccggcgggaccacctgctcaagcactggcgggtgcacaccggggagaccccctac
cagtgccctgtctgcgggaagcacttccgctacaaggagtccctgaattgccaccagaaa
atccactcccgcaacccgcggcctggggaggattcccagcacaacctgggctcggcgggc
acccaaaccgaccatttctgcatgaaaaaagagactaagcagtatgccccccggtccccg
cagtccccccctgtccccgctgcgggcggtgccgtgggggggccccgacggggcggggcg
ctgatgccgtcggcccgccagggggcgctccgccgcgccgccccgcgcccagcccgatgc
ccggcggcgggcggaggtgaagcagcgagcgggcgctggatcctcccggccgcagccccc
ggggccccgggcacggaacaaagggccatggccgagggggcccccgctcaggcgccggag
ccggtgcggccgccgcgctgcccctcgcccctccggccagcggccggccccgagcgcacc
tcggagcgggagacgcagacggcagagctgtccctgaccgtggtggcggccgtacaggcg
gtggagcggaaggtggattcccactccacccgcctgctcgacctggagggtcggacgggg
atggcggagaagaagctgatcgactgtgagaagacagcggcggagctggggaaccagctg
gagagcaagtgtgcagcgctgggcaccctcatccaggagtacgggctgctccagcggcgc
ctggagaacatggagaacctcctgaagaacaggaacttctggatcctgcggctgcccccg
ggcaggaagggggaagtccccaaggtgccggtgacctttgatgacgtgtccgtctatttc
aatgacaaggaatgggagaagctggaggagtggcagaaggagctgtacaagaatgtgatg
aaggggaactacgagtctctgatctccctggactatgcaatttccaaacctggtgttttg
tctcagatcgagcaaggggaggaatcgcggggcaggaatgagcaggacctggaggagagt
gagatcattactgatgccactgcagctggaataagggttgtgatcaaaacggaggagctc
cttcctgaagacagccccgagaaccccgagctgcacgggatgtcggggcagtccgagggg
agcttccagagcccagacgaggaggcggcctgcgagagcccctacggctccgtgtccccg
ccgagggacctcccgggaaccagcctgggggactcgtccgagtatggagccgacttcaac
gagatccagagggtcatcgtccaccacgggagctgcaccgaggatgggatcgtgatcaag
acagaggaggaggaggaggaggaggaggatgacccggacacgctggagccgtgtgccatg
ttctcgggccggagcgagccgccggcgttccccagccacgaggccgggctgggctgtgag
gcgcagtgcagctccaaggcgcagccccgcggcctggccgcccgcgtgaggaagccgtcg
gcctgcgagagggactccggggacatgaagccggccagcggccagcagcggaaccggacg
cgggagagaccctacatctgccccgagtgcgggaagagcttcatgctgaagatcaacttc
atgatccaccagcgcaaccacctcaaggaagggccctacgagtgccacgagtgcgacctc
agcttccgcaacaagcagcagttcctgctgcaccagcgcagccacacgcgccgcggcgtg
ggggtcccgcggcgccccgagcacggcctcaagcccccgtcgcggcccccgcccccgggg
aagccctacaagtgctccgagtgcgagagcagcttcagccacaagtcgagcctcagcaaa
caccagatcacccacgtcggggagcggcccttcacctgcggcgagtgccggcggagcttc
cgcctgcagatcagcctcctcatgcaccagaggatccacgccggcaagaacgagatggcc
ttcctgtgcccccagtgtggcaagaacttcacccggccctcccacctgctgcggcaccag
cggactcacaccggcgagcggccctaccagtgcagccagtgcgagaagaccttcagcgag
aagtccaagctcaccaaccattaccgcatccacacgcgggagcgcccgcacgcctgcgcc
gtctgcgggaagggcttcatccgcaagcaccacctcctggagcaccagcgcatccacacg
ggcgagcggccctaccactgcaccgagtgcggcaagaacttcacgcagaagcatcacctc
ctggagcaccagcgggcgcacaccggcgagcggccctacccctgcaccgagtgcaccaag
tgcttccgctacaagcagtcgctcaagtaccacctgaggacgcacatgggagagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (29)   

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