KEGG   Corvus cornix (hooded crow): 104687555
Entry
104687555         CDS       T03546                                 
Symbol
DDX28
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX28
  KO
K20096  ATP-dependent RNA helicase DDX28 [EC:3.6.4.13]
Organism
ccw  Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ccw03009]
    104687555 (DDX28)
Ribosome biogenesis [BR:ccw03009]
 Eukaryotic type
  Other ribosome biogenesis factors
   104687555 (DDX28)
SSDB
Motif
Pfam: DEAD Helicase_C AAA_22 Helicase_C_2 P-loop_SecA
Other DBs
NCBI-GeneID: 104687555
NCBI-ProteinID: XP_010395022
Position
11:9449508..9452204
AA seq 679 aa
MECHFLPENTRVLCQKGAVGXPPGVTGLARQRGSGSPSVREPSGAGGSPRHTGSFPAEGS
RAVPARAPQARVSSRDRGAGTTLSRQRKKAKEETGTARDTHRPRAAPQRLREAGRTGASA
SFRRHRAAPPPHVRAAMALGRAGPALALPLLLPRRPAGSGTAAAGSPQPLGAVVRIPWAL
RLRLQRGVQRRRRGEGEAAAPRPGKLLLRSRRPELSQPRWQTVGRWEQPPLVSAGWKHRK
AYGDYFQLEPSQEAAPALQAPPAEAGQGPTFAELGLQPALLAGLERLSIGRPTAVQRLAI
PALRRGRSALCAAETGSGKTLAYLLPLLERLLGRPEAAAEAAGPAAPRGLVVLPSRELAA
QVGAVAAALCAPAGLAVRGLTGGGAAGGLRRQLRAPPPGPAVLLGTPGALREALRRRFLA
LERLRWMVLDEADSLMDESFTELLEEILAHAPLAAGAPGPAGPDEERTQVVVVGATFPVG
LSETLAKFTDVGRFVTLGTQSLHCLPPHVQQKFVRLKGQDKLPELLQLLKERPSSGGAVL
IFCNSASTVNWLGYIMDDHKIKHLRLQGQMSAAARAGIFASFQKDDVSVLVCTDLASRGL
DTSNVQLVVNYDFPDTLQDYLHRAGRVGRVGSKARGAVVSFVTHRWDVDLVRKIETAARK
RTGLPGMDSSINKPSPKGG
NT seq 2040 nt   +upstreamnt  +downstreamnt
atggagtgtcatttcctaccggaaaacacacgtgtcctttgccagaaaggggcggtgggt
ngcccgccaggtgtgacagggctcgcccggcagcgggggtcgggctcgcccagcgtgagg
gagccgagcggcgccgggggatctccgcgccacaccggctccttccccgcggaggggtcc
cgggccgtccctgccagagcccctcaggcccgcgtctcctcccgcgatcgcggcgcgggg
acaactctcagccggcagcggaaaaaggcgaaagaagagaccggcaccgcccgcgacact
caccgtcctcgcgcggctccgcagcggctccgcgaggcggggagaaccggggccagcgcc
tctttcaggcgtcatcgggcagcgccgccgccccacgtgagagccgcgatggcgctgggc
cgcgccgggccggcgctcgccctcccgctgctgctgccgcggcggccggcgggcagcggg
acagcggcggcggggagcccgcagcccctcggggccgtggtgcgcatcccctgggccctg
cggctgcgcctgcagcggggcgtgcagcgccggcggcgcggggagggggaggcggcggcg
ccgcgtcctgggaagctgctgctgcggagccgacggccggagctgagccagccccgctgg
cagacggtggggcgctgggagcagccgccgctggtgtcggcgggctggaagcaccggaag
gcgtacggggattacttccagctggagccctcgcaggaggcggctcctgccctgcaggcg
ccgccggctgaggcgggacagggcccgaccttcgccgagctggggctgcagccggcgctg
ctggccggcctggagcggctctccatcggccggcccacggccgtgcagcgcctcgccatc
cccgcgctgcgccgcggccgcagcgccctgtgcgccgccgagacgggcagcgggaagacg
ctggcgtacctgctgccgctgctggagcgcctgctcggccgccccgaggcagcggcggag
gcggcggggccggcggcgccccgcgggctggtggtgctgccgtcgcgggagctggcggcc
caggtgggcgcggtggcggcggcgctgtgcgcgcccgcggggctggcggtgcgcggcctc
acgggcggcggggccgcgggcgggctgcggaggcagctgcgggcgccgccgccgggcccc
gccgtactgctgggcacccccggcgcgctgcgggaggcgctgcggcggcgcttcctggcc
ctcgagaggctgcgctggatggtgctggacgaggcggactcgctgatggacgagtccttc
acggagctgctggaagagatcctggcacacgcgccccttgccgccggcgctcccgggcca
gccggtcccgacgaggagaggacgcaggtggtggtggtcggagccacgttccccgtgggg
ctcagcgagacgctggcgaagttcactgacgtgggccggtttgtcaccctcggcacccag
agcctgcactgcctgccgcctcacgtccagcagaagtttgtccgcctcaaaggccaggac
aagctgcccgaactgctgcagctgctcaaggagcgcccatcatctggcggggctgttctc
atcttctgcaacagtgccagtactgtcaactggctgggctatatcatggacgaccacaaa
atcaagcacctgaggctgcagggacagatgtcggcagctgctagagctggcatctttgcc
tctttccagaaggatgatgtgtctgtccttgtctgcactgaccttgcctcacgggggctg
gacaccagcaatgtgcagctagtggtcaactatgacttcccagacaccctgcaggactac
ctgcaccgcgcagggagagttggccgggttgggagcaaggcgcgtggagctgtggttagt
tttgtcacccatcggtgggatgtggacctggtacggaaaatagagactgcagcccggaaa
aggacaggtctcccaggaatggactcctctattaataagccttcacctaaaggaggttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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