KEGG   Corvus cornix (hooded crow): 104687864
Entry
104687864         CDS       T03546                                 
Symbol
CD40
Name
(RefSeq) tumor necrosis factor receptor superfamily member 5 isoform X1
  KO
K03160  tumor necrosis factor receptor superfamily member 5
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw04060  Cytokine-cytokine receptor interaction
ccw04514  Cell adhesion molecules
ccw04620  Toll-like receptor signaling pathway
ccw04672  Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    104687864 (CD40)
   04514 Cell adhesion molecules
    104687864 (CD40)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    104687864 (CD40)
   04672 Intestinal immune network for IgA production
    104687864 (CD40)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04050 Cytokine receptors [BR:ccw04050]
    104687864 (CD40)
   04090 CD molecules [BR:ccw04090]
    104687864 (CD40)
Cytokine receptors [BR:ccw04050]
 Tumor necrosis factor receptors
  TNF receptor superfamily
   104687864 (CD40)
CD molecules [BR:ccw04090]
 Proteins
  104687864 (CD40)
SSDB
Motif
Pfam: TNFR_c6
Other DBs
NCBI-GeneID: 104687864
NCBI-ProteinID: XP_039419664
Position
20:complement(6707048..6712690)
AA seq 292 aa
MPGRVPRSGLPGPRQGGGAIWTARYPLQCWEPGDALTCFDKQYMYKGRCCNRCQPGKKLV
SECNKTEDSVCAPCGSGHYQPSWTKEKHCAPHDTCEGNAGLIVKMQGNATHNTVCQCRAG
MHCSDISCQTCVENQPCQLGSGFVAAKAMNRMSSPCEPCAEGTFSNVSSKTEPCYPWTSC
EEKGLVVKVKGTNSSDVICESSRRSSLSVLIPITAAVFTCLLGVCIYCLVHTDSRRRVPN
EIEAGEPGENPDTPQPTEQDENVLPVQETLLRCQPVAQEDGKESRISEQEML
NT seq 879 nt   +upstreamnt  +downstreamnt
atgcccggtcgggtccctcggtccggtctcccgggaccccgccagggaggaggagctatc
tggactgcccggtatcctctccagtgctgggagcctggtgatgccttaacatgctttgat
aagcagtatatgtacaagggcagatgctgcaaccggtgtcagccagggaaaaagctggtc
tctgagtgcaataaaacagaagactctgtctgtgccccctgtgggagcgggcactatcag
ccgagctggaccaaggagaagcactgtgctcctcatgatacctgtgaaggcaatgctggc
ctcattgtgaagatgcaaggaaatgcaacacacaacacggtgtgccagtgccgggccggc
atgcactgctctgacatcagctgccagacctgtgtggagaaccagccttgccagcttggc
tctggcttcgtggcagccaaggccatgaaccggatgtcatccccctgtgaaccctgtgca
gaaggcaccttctccaacgtctcttctaaaaccgagccgtgctatccctggacaagttgt
gaggaaaaggggctggtggtgaaggtgaaagggacgaactcctcggatgtgatctgcgag
tcgagcaggcgctcctcgctgtcagtgctgatccccatcacggctgcagtcttcacgtgc
ctcctgggtgtctgcatctactgcctggtccacacagattccaggcgacgggtgccaaac
gagatagaggctggggagcccggagagaacccagataccccgcagcccacggagcaggat
gagaatgtcttgcctgtgcaggagaccctactcaggtgccagcctgtggcccaggaagat
ggcaaggagagccgcatctcagagcaggagatgctgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (1)   
   Pfam (1)   
All databases (32)   

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