KEGG   Corvus cornix (hooded crow): 104689552
Entry
104689552         CDS       T03546                                 
Symbol
GEMIN5
Name
(RefSeq) gem-associated protein 5 isoform X1
  KO
K13133  gem associated protein 5
Organism
ccw  Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccw03019]
    104689552 (GEMIN5)
   03041 Spliceosome [BR:ccw03041]
    104689552 (GEMIN5)
Messenger RNA biogenesis [BR:ccw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     104689552 (GEMIN5)
   mRNA cycle factors
    P-body specific factors
     104689552 (GEMIN5)
Spliceosome [BR:ccw03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    104689552 (GEMIN5)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 MIOS_WD40 Nup160 Lgl_C ANAPC5
Other DBs
NCBI-GeneID: 104689552
NCBI-ProteinID: XP_039415523
Position
13:5669104..5686169
AA seq 1531 aa
MGMGVRALPASPNWYSSRCSDASSDGRLFGFAARHRVCLLDVAAAAPAFYGELIGHTDRI
SGFAFCPCPGQSSLCASSSDDGSVKIWDTGTLSPVLEYSLHQNAISALHWSPLVKDLIVS
GDEKGVIVCYWHNRNDSQQFFPEPRTVFCLTCSPHHENLVAIGYKDGMVVVIDISRKREV
VHRLRGHEDEIHCLAWCPVPGEERLPAWQDELQAAPSEEGKVPNGELTQDTATKKGCYLA
SGSKDQTIRIWSCTRGRSMMTLKLPPTKRRGGAVDPAVKERIWLTVHWPAGHPTEIVSSG
FGGELLLWNLTQPGKRKWTLLGSSEGQNHSRIVFNLSSVKHQDKELLFSISMDRDVKCWD
LSTLDCSWTMPSLGGFVYSLAFSPVDTGCLAIGVGDSMIRVWNTLSMNNIYDVKTFWQSI
KSKVTALSWHPTKEGSLAFGTDDGKVGIFDTLSSSAKNKPPQISSTYHKKTVYTLAWGPP
TPPLTSGEESEQPSVTLYSCAGEGIVFQHNPWKLNGEANDINKVIRDTNSIKHKLPARTE
ISWKPDGKLLALGNEDGSIEIFQAPNLKLLCTIQQHHKLINAIRWHHEHGTQPELSYLIA
SGSINATIYVHNLKNVVENSSESPLTITEPFRTLAGHTAKITSLSWSPHHEGRLVSACYD
GTAQVWDVMKEEPLCNYRGHQGRLLSVQWSPLDSDCVYTGADDFSVHKWHISKQEHTRPP
QGKKSVELEKKRSMQPKVKAKKKKKPTGKSPGKQDANDAMNGDDSMKEMLLEENGVSDHE
GEKEAQEAELADKVSVTVSRDTSSSACDYSSFSSPKPFVTQKAAPVKKDPPKEKPAPDAS
LKKKKPRSILPFSTLMDHRSKDDLHQDCLKLAACLKTKDNNEDVSPDLKDCIHLGLFTDR
DSLHKMIDMEGKHHLENGHAELFQQLMLWKGDLKGVLQAAAERGELTDQLVAMSPMAGYQ
AWVWTVEAFAKQLCFQEQYVKAASHLLSIHKVYEAIELLKVNNFYREAIVMAKARLRPED
PILKDLYTSWAALLEKDGHYSMAAKCYLGASSPYDAVKVLSKKGDVTSLKTAAELALISG
EEELSATLSLRCAQDLLLSRNWVGAQEVLQQHKTLFGQSLVFCLNELLCRCLSERNPCER
KSPVPPCYHNWELNRQASFFDMVTEVWQNVLGMDTTERATCAQEQLHRIEHPPSTSNTHP
KQVLFHISHDLALAALSCHLGTWDEAVKNILGAVTRSFDAGNFTLMQEICSIILPEGCDD
LRHKLDSTKSQSMDACRSLEGFVAYRLLYDLWWNPPKDCLGLQKAVLGPVLCPSEQTAPE
KSCVSGDPSPEETVRTAAEMGENLCSTTDVHKCETQSDSGTDSTDLVDRQSKLKGCQVLL
SEEMAALQNTQRDIAEVQETLAEMIRQHQQQRNNLQENTNGNTQGSNLEQSSETESDKRC
SDSNQMNCKDEVKQPITLPELTKQLLKAKQKLAEFPDNLKVFPFPDVLECCLVLLHLGSQ
CPSELQEEALALLRKHGSAGIYKKAGRSFLT
NT seq 4596 nt   +upstreamnt  +downstreamnt
atgggcatgggggtgcgggcactgcccgcctcccccaactggtacagcagccgctgcagc
gacgccagcagcgacggccgcctcttcggcttcgcggcgaggcaccgcgtctgccttctg
gatgtcgccgccgccgcgcccgcgttttacggggagctcatcgggcacacggacaggatc
tccgggttcgccttttgcccctgccccgggcagagcagcctctgcgccagcagctccgac
gacggaagcgtcaaaatctgggacaccgggacgctgtcgccggtgctggagtacagcctg
caccagaatgcaatctcggcgctgcattggtcacctcttgtgaaagatctgattgtgtct
ggtgatgagaaaggagtcattgtttgttactggcacaacagaaatgacagccagcagttc
ttcccagagcctcggacagttttctgcctcacctgttctcctcatcatgaaaacctggtg
gccattggctacaaggatggcatggtggttgtaattgatatcagcaggaagagagaagtt
gtgcaccggctgagaggccacgaggatgaaatacattgcctggcctggtgccctgtgcct
ggggaagaaaggttacctgcttggcaggatgagctccaggcagctccttcagaggaaggc
aaggttccaaatggggagctgacacaggacacagccacgaagaaaggttgttacctggcc
tctggaagcaaggatcaaaccatacgaatatggagctgtaccagaggcaggagtatgatg
actctgaagctgccacccaccaagaggagaggtggagccgtggatccggcggtcaaggag
cgcatttggctgactgtgcactggcctgctggccatcccactgagattgtgtccagtggc
tttggaggagaactgctcctttggaatttgacccagcctggcaaacgcaaatggactctt
ctgggatcttcagaaggacaaaaccactcccgaattgtgttcaatctcagttctgtgaag
caccaagacaaagagctccttttttctatttcaatggacagagatgtgaaatgctgggat
ctgtcaactctggattgcagctggaccatgccttcccttggaggatttgtctacagcctt
gccttctcccctgtggacacaggctgtcttgccatcggggttggagacagcatgatccgc
gtgtggaatactttgtccatgaacaatatttatgatgtcaaaaccttctggcaaagcata
aagtctaaggttacagcattatcctggcatccaactaaggaaggctccttggcttttgga
acagatgatggaaaagttggcatatttgacaccttgtccagcagtgctaagaataagcca
cctcagatctccagtacttaccacaagaagactgtgtacacattagcctgggggcctcca
actcctcctctgacttctggagaagaaagtgaacagccctctgtaactttgtacagttgt
gctggagaaggaattgtttttcaacacaatccctggaagcttaatggagaagcaaatgac
atcaacaaagtcatccgagacaccaattcaatcaaacacaagctgcctgcacgtacagag
atcagctggaaaccagatggcaaactcctggctcttggcaatgaggatggctcaattgaa
atatttcaggcaccaaacttgaagctgctctgcactatccagcagcatcacaagctgatc
aatgccattcgttggcaccatgagcacgggacccagccagagctgagttacctgatagct
tcaggctccatcaatgccaccatttatgtgcataatctgaagaatgttgtagagaactct
tcagaaagtcctttgacaataacagagccttttcgaactctggctgggcacacagctaaa
atcacaagtctttcttggagcccccaccatgagggaagattggtgtctgcttgctatgat
ggcactgcacaggtgtgggatgtgatgaaggaggagccactctgcaactaccgagggcac
cagggccgcctgctgagtgtccagtggtcaccactggattcagattgtgtttatacagga
gcagatgatttttctgttcacaagtggcacatctccaagcaggaacatacacggcctcct
cagggcaaaaagagtgtagaattagagaagaaaagaagtatgcagccaaaagtcaaagcc
aagaagaagaaaaagccaacaggcaagagtccaggcaagcaggatgcaaatgatgccatg
aatggagatgacagcatgaaggaaatgttgctggaggaaaatggagtgtcagaccatgaa
ggagaaaaagaagctcaggaggcagagttggctgataaagtctctgtgactgtgtccagg
gatacatcttcatctgcatgtgattattcttcattcagctcaccaaagccttttgtgacc
cagaaagctgctcccgtgaaaaaggatccacctaaagagaagccagctcctgatgcctct
ctaaagaagaagaagcctcgttctattctgcccttcagcacattaatggatcacagatca
aaagatgacttgcatcaggactgcttgaagctggctgcatgtctgaaaactaaagataat
aatgaagatgtgtcccctgacctcaaggattgcatccacttggggctgttcacagacagg
gattctctgcacaagatgattgatatggaaggaaagcaccacttggagaatgggcacgca
gagctcttccagcagctcatgctatggaaaggagacttgaagggtgttctccaggcagct
gctgagaggggggagctgacagaccagctcgtagccatgtcacccatggctggataccag
gcctgggtttggacagtggaagcctttgccaagcagctgtgtttccaggagcaatacgtg
aaggctgcctcccatctcctgtccatccataaagtctatgaggctattgagctcctgaaa
gtgaacaatttttacagggaagcgattgtaatggctaaggccaggctgcgtccagaagat
ccaattctgaaggatctctacaccagctgggcagctctgctagagaaagatggtcattat
tccatggctgccaagtgttatctgggggcttcctcaccctatgatgcggttaaagtgttg
tcaaagaagggggatgtgacatcccttaaaactgctgctgagcttgctctgatatctggg
gaggaggagttgtcagcaactttgtctttgagatgtgcccaagacctgctgttatccagg
aactgggtgggagctcaggaagtccttcagcaacataaaactttatttggacaaagcctt
gttttctgcctgaacgaactgctctgcaggtgcctcagtgaaaggaatccctgtgagcga
aagagccccgtgcccccctgttaccacaactgggagctgaacagacaggcctcgtttttt
gacatggtgacagaagtgtggcagaatgtgctgggcatggacaccactgaacgagccaca
tgtgcacaggagcagctgcacaggattgagcatcctccttcaaccagcaacacacaccca
aaacaggtgcttttccatatctcccatgacctggcccttgcagccctgagctgtcacttg
ggtacgtgggatgaggcagtgaaaaatattcttggagctgtgacccgcagttttgatgct
gggaatttcactctgatgcaggagatttgcagtatcatccttcctgagggctgtgatgac
ctgagacacaaactggacagcacaaagtctcagagcatggatgcctgcaggagtttggag
ggcttcgtggcttacagactgctctatgacctgtggtggaacccacccaaagactgcctt
ggcctgcagaaggctgtgttgggtcctgtgctgtgtcccagtgagcagacagctcctgag
aagagttgtgtttcaggtgacccatcccctgaggaaacggttcgaactgcagctgagatg
ggtgaaaacctctgcagtacaactgacgttcacaagtgtgagacacaaagtgactcagga
actgactcgactgatctggtagacagacagtcaaaactgaagggttgccaagtgctcctt
tcagaagagatggctgccttgcagaacacccagagagacatagctgaggtccaggagact
ttagcagaaatgatccggcagcatcagcagcagaggaacaatctccaggaaaacacaaat
ggaaacacgcagggaagcaacctggaacagagttcagagactgaatcagacaaacgatgc
tctgacagcaaccagatgaattgcaaagatgaagtaaagcaaccgattacgctccctgag
ctcacaaagcagcttctgaaagcaaagcagaaattagctgaattcccagacaatttaaag
gtcttccccttccctgacgtgctggagtgctgccttgtactccttcaccttggatcccag
tgtccttctgagctgcaggaagaggctctcgctctccttaggaaacacggtagtgctggg
atttacaaaaaggctggcaggagcttcttgacatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (36)   

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