KEGG   Corvus cornix (hooded crow): 104689733
Entry
104689733         CDS       T03546                                 
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
  KO
K05641  ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw02010  ABC transporters
ccw04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    104689733 (ABCA1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    104689733 (ABCA1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ccw02000]
    104689733 (ABCA1)
Transporters [BR:ccw02000]
 ABC transporters, eukaryotic type
  ABCA (ABC1) subfamily
   ABCA1, 2, 3, 4, 7, 12, 13 subgroups
    104689733 (ABCA1)
SSDB
Motif
Pfam: ABC_tran ABC2_membrane_3 AAA_21 DUF4162 AAA_23
Other DBs
NCBI-GeneID: 104689733
NCBI-ProteinID: XP_019141758
Position
Z:complement(31649570..31741857)
AA seq 2262 aa
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGESPGIVGNFNASIVSRLFSDARRLLLYSQQDT
SIKDVQKVLGKLHKLGNSSALDLKLRDFLIDNETFSDFLHHNVSMPSSAVEELLDAGVNL
QQVIVSGYRMRLQDLCKNSTLSEFLTIQNQTAATDSEAFICTLSKEKLHAAEQAFRANLN
PLKPLQRRLSFNSSLWDLSETVETLRESIGKLVKELLSMKSWSDMRQEVMFLTNVNASNS
STQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEDDVINFYDNSTTPYCN
EIMKNLESSPLSRIIWRALKPLLIGKILYTPDTPAVRKVMSEVNRTFQELGVFRDLGGMW
EEISPKIWTFMESSQEMDLIRTLLKGKALWDLHLPASNWTVEDVARFLSNNPEDFETENG
SLYTWMDAFNETDRAIQTISRFMECVNLDKLEPVPTEVQLINKSLELLDERRFWAGIVFT
EIAPDSTDLPQHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFVYLQDV
VEQAIIRVQTGTEKKTGVYVQQMPYPCYVDDVFLRVMSRSMPLFMTLAWIYSVAVIIKGI
VYEKEARLKETMRIMGLDNGILWLSWFISSLVPLLMSAGLLVLILKMGNLLPYSDPSVVF
IFLSIFGVVTILQCFLISTVFSRANLAAACGGIVYFTLYLPYVLCVAWQDHISFSLKIFA
SLLSPVAFGFGCEYFALFEEQGVGVQWDNFFESPLEEDGFSITTSAVMMLFDTFLYGVMT
WYIESVFPGQYGIPRPWYFPFTKSYWFGEEPQDRQHPHPDQKGSSEVCKEEEPVHLSLGV
SIQNLVKVYRDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFI
LGKDIRSELSTIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLPEKKVKEEMEQMATDV
GLPHKLKARTSRLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLS
SCRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVPEARLVEDI
GHELTYVLPYKAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVDAE
TSDGTLPARRNRRVFGDRQSCLRPFTEDDAFDPNDSDIDPAESRETDLLSGMDGKGSYQM
KGWKLTQQQFVALLWKRMLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLEL
QPWMYDEQYTFVSNDAPEDAGTHKLLDALLDKPGFGTRCMQGHSIPDTPCTVGQKEWTTA
SVPESVLDTFLKGNWSMENPSPSCECSSEKIKKMLPVCPPGAGGLPPPQREQDTADILQN
LTGRNISDYLVKTYAQIIGKSLKNKVWVNEFRYGGFSLGASSSLVLPPSHEVTDAIKQVK
KILELAQGSSGDRFLNSLSSFMKGLDTKNNVKVWFNNKGWHAIASFVNVINNAILRASLQ
QGENPSAYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQE
RVSKAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVVIIFICFQQKSYVSSSNLPVLA
LLLFLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLKDI
NDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGEDRFVSPLSWDLVGRNLFAMAVE
GVVFFLITVLIQYRFFIKPRPVYAKLPPVNDEDEDVTRERQRIISGGGQSDILEIKELTK
IYRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILS
NIQEVHQNMGYCPQFDAVNELLTGREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYGE
KYAGNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVL
TSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVEEFF
GHAFPGSVLKEKHRNMLQYQLPSSPSSLAKIFSILSQNKKRLHIEDYSVSQTTLDQVFVN
FAKDQSDDDHTKDLSLHKNQTVVDIAILNSFLQDEKVKESCV
NT seq 6789 nt   +upstreamnt  +downstreamnt
atggctttctggacgcagctggggttgctgctatggaagaactttacctacagaagaaga
cagactttccagctgctgattgaagttgcctggcctctgtttatcttctttatcctgatc
tctgtaagactttcatatccgccctatgagcagcatgaatgtcattttccaaataaagct
atgccttcagcaggaaccttgccatggatacaggggatcatctgcaatgccaacaaccca
tgtttccgctacccaactcctggggaatcccctggtattgttggaaacttcaatgcctcc
attgtttcccgcctgttctcggatgccaggaggttactgttgtacagccaacaggacaca
agtataaaggatgtccagaaggtcctgggaaaactacacaagttgggaaattcctctgcc
ttagacctgaaacttcgggatttcctgattgacaatgagacattctctgacttcctccat
cataatgtgtccatgccatcatctgcagtagaggagctgctggatgcaggggtcaacctc
cagcaggtcattgtgtctggttatcgaatgcgactgcaagatctctgcaaaaactcaaca
ttgtctgaatttctcaccatccaaaatcagacggcagccacagactctgaagccttcatt
tgcaccttgtcaaaggaaaaactccatgcagctgagcaagccttccgtgctaaccttaat
cctttgaagcctcttcagagacgactttctttcaattcctccttgtgggatctctcagaa
actgtggaaactttgagagagagcattgggaagcttgttaaagagctgctgagcatgaag
agctggagtgacatgaggcaagaggtgatgttcctgaccaatgtgaatgcctcaaactcc
tctacgcagatctatcaggctgtgtcacgcatcgtgtgtggccatcctgagggtggaggg
ctcaaaattaaatccctcaactggtatgaggataacaattacaaagcactgtttggaggc
aacagcactgaagatgatgtgattaacttctatgataactccacaacaccctactgcaat
gagataatgaagaacctggaatccagcccgctttccaggattatctggagggctttgaaa
cccttactgattgggaagatcttgtacactccagatacgccagctgtaaggaaggtcatg
tctgaggtgaacaggacattccaggagctgggtgtgtttcgtgacctcgggggaatgtgg
gaggagataagcccaaagatttggacatttatggaaagtagtcaggaaatggatctcatt
cggacgttgctgaaaggcaaagccctctgggacctgcatttgccagcttccaactggaca
gtggaagatgttgctcgtttcctgtcaaacaatccagaggactttgagacagaaaatggc
tctctgtatacctggatggatgccttcaatgagacagaccgggctatccagaccatctcc
cgcttcatggagtgtgtcaacttggacaaactggagcctgtgcccacagaagtccagctc
ataaacaagtccttggagcttctggatgaaaggaggttctgggccggcatagtcttcact
gaaatagctcctgacagcacagaccttcctcagcatgtgaaatacaagatacgcatggac
attgataatgtggagaggaccaacaagatcaaggatgggtactgggatcctggtccccgt
gctgacccctttgaggacatgcgctatgtctggggaggctttgtctacctgcaggatgtg
gtagaacaggccatcatcagagttcagacaggcacggagaagaagacaggagtttatgtg
cagcagatgccctacccatgttacgtggatgacgtatttctgcgtgtcatgagccgctcc
atgcctctcttcatgactctagcttggatctactcagtggctgtgataattaagggcatt
gtgtatgagaaggaagcccgcctgaaagaaacaatgaggattatgggacttgacaatggc
atcctttggttaagttggttcattagtagccttgtccctctcctgatgagtgcaggattg
ctggtgctgatcctgaagatggggaatctgctgccctacagcgaccctagtgtggtgttc
attttcctctcaatcttcggtgttgtgaccatcctccagtgcttcctcatcagcaccgtg
ttctccagggccaacctggcagctgcctgtgggggcattgtctacttcacgctgtaccta
ccttatgtgctgtgtgttgcctggcaggaccatatcagcttctcactcaagatttttgcg
agcctgctgtctccagtagccttcggtttcggttgcgagtacttcgcacttttcgaggag
cagggagttggtgttcagtgggacaacttctttgagagcccattggaagaagatggcttt
agcatcaccacatcggctgtcatgatgctgtttgatacttttctgtatggagtcatgacc
tggtacattgaatctgtcttcccaggccagtatgggattcccagaccctggtactttcct
tttacaaagtcctattggtttggggaggaaccacaggacaggcagcatccccatcctgac
cagaaggggtcttcagaagtctgcaaggaagaagagccggtgcatctgagtcttggtgtt
tccatccagaacctggtcaaagtttaccgtgatgggaagaaggttgctgtagatggtctc
acacttaacttctatgaaggacaaatcacctcctttctgggacataatggagcagggaaa
accactaccatgtcgattttgactggcttgttccccccaacttcgggtacagccttcatc
ctgggcaaagatatccgctctgagctgagcaccatcaggcagaacctgggagtatgtcca
caacacaatgtgctgtttgacttgctgactgtagaggagcacatctggttctatgctcgg
ctcaaagggctgccagaaaagaaggtgaaagaggagatggagcagatggcaacagatgtt
ggtttgcctcacaaactgaaagctaggacaagcagactctcaggtggcatgcagaggaag
ctctctgttgccttagcatttgtcggtggctccaaggttgtcattctggatgagcctaca
gctggggtagatccttattctcgcagagggatatgggaactgcttctgaagtatcggcaa
ggtcgcactatcattctctccacacaccacatggatgaggcagacattctgggggaccgg
attgccatcatttctcatggcaagctctgctgtgttggctcttctctcttcctgaagaac
cagctgggaacaggctattatttgaccctggtcaaaaaggatgtggattcctctctaagc
tcctgccgaaacagcagcagcacagtttcctatctgaaaaaggatgacagtgtctctcag
agcagctctgatgctggccttggcagtgaccatgaaagtgacacactgacaatagatgtc
tctgcaatttcaaatctcattacgaagcatgttcctgaggcaagactagtagaggacata
ggccatgaattaacctatgtcttgccatacaaagctgctaaagagggagcttttgtagag
ctgttccatgaaattgatgaccgtctttccgatcttggcatttccagctatggcatctcc
gaaactactctggaggagatcttcctgaaagtggctgatgatagcggtgtggatgcagaa
acctcagatgggacgttgccagccagaaggaacagacgtgtgtttggagacagacagagc
tgccttcgtccatttacagaagacgatgcatttgatcctaatgactcagacatagatcca
gcagaatccagagagacagaccttctcagtggcatggatgggaaaggctcctaccagatg
aagggctggaagctcacccagcagcagttcgtggctctgttgtggaagaggatgctcatt
gccaagagaagccggaagggcttctttgcccagattgtgcttccagctgtctttgtgtgt
attgctctcatgttcagcctgattgttcctccttttgggaagtatcccagcctggaatta
caaccctggatgtatgatgagcagtacactttcgttagcaacgatgctccagaagatgca
ggcactcacaagctgttggacgcccttcttgataagcctgggtttgggacacgctgtatg
cagggacattccatcccagacactccttgtactgtggggcagaaggaatggaccactgct
tcagtcccagagtcagtcctggacaccttcttgaaaggcaactggagcatggagaaccct
tccccatcttgcgagtgcagcagtgagaagatcaagaagatgctgcctgtgtgcccccct
ggtgcaggcgggctgccacccccacagcgtgagcaagacacagctgacatcctccagaat
ctgacaggccgcaatatatcagactacctagtgaagacctacgcacagatcattgggaaa
agcttaaagaataaagtctgggtgaatgagttcaggtatggtggcttttccttgggagcc
agcagttcccttgtgcttcctccaagccatgaagtcactgatgccattaagcaggtgaag
aaaatcttggagctggcacaggggagttctggagatcgatttctcaacagcttatcaagt
ttcatgaagggcctggatacaaagaataacgtgaaggtgtggtttaacaacaagggctgg
catgccattgcatccttcgtgaatgtgatcaacaatgccatccttcgggccagcctccag
cagggtgaaaaccccagtgcttatgggatcactgccttcaatcacccactcaacctcacc
aagcagcagctctctgaagtagccctgatgaccacctctgtagatgtcctcgtctccatc
tgtgtgatctttgccatgtcctttgttcctgccagctttgtggttttccttattcaggaa
cgtgtcagcaaggctaaacacttgcagttcatcagtggtgtgaagcctgtgatctactgg
ctggccaattttgtatgggatatgtgcaactacattgttccagctacactagttgtcatc
atcttcatctgcttccaacagaagtcctatgtatcctcctccaacttgcctgtgctggct
ctccttctgtttctctatgggtggtccatcacccctctcatgtatccagcctccttcgtg
ttcaaaatccccagcacggcatatgttgtgctgaccagtgtgaaccttttcattggcatc
aatgggagtgtggccacctttgtcctggagctcttcaccaacaataagctgaaggacatc
aatgacatcctgaagtctgtcttcctcatcttcccccacttctgcctggggcggggactc
attgacatggtgaaaaaccaggctatggctgatgctctggagagatttggagaggatcgt
tttgtgtcccctctgtcatgggacctggtgggaaggaatctctttgccatggcagtagag
ggcgttgtcttttttctcatcacagtgctcatccagtacaggttcttcatcaaacccagg
cctgtctatgccaagctgcctcctgtgaatgatgaagatgaggatgtaaccagagagagg
cagaggataattagtggaggaggacagagtgacattttggaaatcaaggagctaaccaag
atttacagaatgaagagaaaaccagcagttgataggatctgtgttggaatcccccctgga
gagtgctttggactcctgggagtaaatggtgctggcaagtcatccacttttaagatgcta
actggagatacagatgtgacaggaggagaagctttcctcaaaggaaacagtatcttgtcc
aacatccaagaagtccatcagaacatgggctactgcccacagtttgatgctgttaatgaa
ctgctgacagggcgagagcacctggagttctttgcactcctgagaggtgttccagagaaa
gaagtctgcaaggttggcgagtgggcaattcggaaactgggccttgtgaaatatggagaa
aaatatgctgggaattacagtggagggaacagacgcaagctttccacagccattgccctc
attggagggccacctgtggtgttcttggatgagccaacaacagggatggatcccaaagca
cgtcgtttcttgtggaactgtgctctgagtgtaatcaaggaggggagatcggtggtgctc
acatctcacagcatggaagaatgtgaagccctgtgcactcgaatggcaataatggtcaat
gggcgatttaggtgcctgggcagtgtccagcatctaaagaacaggtttggagacggttac
accatagtggtgagaattgcaggggcaaacccagacctgaagcctgttgaggagttcttt
gggcatgccttccctggaagcgtcctgaaggaaaaacatcggaatatgctgcagtaccaa
cttccctcttcaccatcctccctggccaaaatattcagtattctctcccagaacaaaaag
agactccacatagaagactactccgtttctcagaccacacttgaccaagtttttgtaaat
tttgctaaggaccaaagtgacgacgaccatactaaggacctgtcactgcataaaaaccag
actgtggtagacattgcaatccttaactccttcctgcaagacgagaaggtaaaagaaagt
tgtgtgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (5)   
   Pfam (5)   
All databases (34)   

Download RDF
DBGET integrated database retrieval system