KEGG   Corvus cornix (hooded crow): 104692215
Entry
104692215         CDS       T03546                                 
Symbol
PUS3
Name
(RefSeq) tRNA pseudouridine(38/39) synthase isoform X1
  KO
K01855  tRNA pseudouridine38/39 synthase [EC:5.4.99.45]
Organism
ccw  Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ccw03016]
    104692215 (PUS3)
Enzymes [BR:ccw01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.45  tRNA pseudouridine38/39 synthase
     104692215 (PUS3)
Transfer RNA biogenesis [BR:ccw03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    104692215 (PUS3)
SSDB
Motif
Pfam: PseudoU_synth_1 WD40_alt
Other DBs
NCBI-GeneID: 104692215
NCBI-ProteinID: XP_039420819
Position
24:complement(5219584..5225758)
AA seq 469 aa
MAEESSATDHEQLLRRVQELEVEVKRLQEKLREEKEGAGRREAPPAPGKARKRQQRPFDF
SAHSRRHVALRIAYLGWGYQGFASQENTPNTIEEKLFEVLKKTRLVDDRQTSNYHRCGRT
DKGVSAFGQVISLDLRSSLPEGQQLNGHTGEGQQEELRYTHILNRVLPPDIRVLAWAPVE
PEFSARFSCLSRTYRYFFPCAQLDVALMDTAAQRYVGTHDFRNLCKMDVANGVLNFQRTI
LNARVTWVDRGGEAGPWDPFRLCQFEVTGQAFLYHQVRCMMAVLFLIGQGMESPEVIDEL
LNVEKNPRKPQYSMAVEFPLVLYDCEFPDLQWLYDPEVQGFNVTHLQQLWASHAVKTHVL
RDMLAGLDAAPMGTRKGPGSSLVPWGELQPPLHSQISGFVEGVQARTYKPLLARPRCEGL
EARIEHFVRRGRIDPPQGPGDWAGEPPEGKRGSSGAPEQLPKRICTDTE
NT seq 1410 nt   +upstreamnt  +downstreamnt
atggctgaggagagctcagctactgaccatgagcagctcctgaggagggtgcaggagctg
gaagtggaggtgaagcggctgcaggagaagctccgggaggagaaggagggtgctgggagg
agagaggctcctccagcccctgggaaagccaggaaacgccaacaacggccctttgatttc
agcgcccacagccgcagacacgtggcactgcgcatcgcctacctgggctggggctaccag
ggctttgccagccaggagaacacccccaacaccatcgaggagaagctctttgaagtcctg
aagaagacgcggctggtggacgacagacagacatccaactaccaccgctgcgggcgcacg
gacaagggtgtcagtgccttcgggcaggtgatctccctggatctccgctccagcctgccg
gaggggcagcagctcaacggccacacgggtgaggggcagcaggaggagctccgctacacc
cacatcctgaacagggtgctgccacctgacatccgggtgctggcctgggcccccgtggag
ccagagttcagcgcccgcttcagctgcctgagccggacctaccggtacttcttcccctgc
gcccagctggacgtggccctcatggacaccgcggcccagcgctacgtgggcacccacgac
ttccgcaacctctgcaagatggacgtggccaacggggtgctcaacttccagaggacgatc
ctcaacgccagagtgacatgggtggacaggggaggagaagccgggccatgggatcccttc
cggctgtgccagttcgaggtgacgggacaggcattcctgtaccaccaagtccgctgcatg
atggccgtgctcttcctcattggccagggcatggagagcccggaagtcattgacgagctg
ctgaacgtggagaagaacccccggaaaccgcagtacagcatggcggttgagttccccctg
gtcctgtacgactgcgagttcccagacctgcagtggctctatgacccagaggtgcagggc
ttcaacgtgacacacttgcagcagctctgggccagccacgccgtcaaaacccacgtgctc
cgggacatgttggcagggctggatgctgctcccatgggcaccagaaaaggtccagggagc
agcctggtaccctggggagaactgcagcccccactccacagccagatcagcggcttcgtg
gaaggggtccaagcccgcacctacaagcccctgctggcccggcccagatgcgaggggctg
gaggcccggatcgagcacttcgtgcgaaggggccgcatcgacccgccccaggggccgggg
gattgggccggggagccccccgagggcaagcggggcagcagcggagcccccgagcagctg
cccaagaggatctgtacggacaccgagtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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