KEGG T01780: COCOR

Corallococcus coralloides: COCOR_03852

Entry

COCOR_03852 CDS T01780

Gene name

ddlA

Definition

D-alanine--D-alanine ligase

Orthology

K01921

D-alanine-D-alanine ligase [EC:6.3.2.4]

Organism

ccx Corallococcus coralloides

Pathway

ccx00473	D-Alanine metabolism
ccx00550	Peptidoglycan biosynthesis
ccx01100	Metabolic pathways

Class

Metabolism; Metabolism of other amino acids; D-Alanine metabolism [PATH:ccx00473]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:ccx00550]

SSDB

Motif

Pfam:

Dala_Dala_lig_C ATP-grasp_4 ATP-grasp_3 ATPgrasp_Ter GARS_A CPSase_L_D2 RimK ATP-grasp Dala_Dala_lig_N TTL ATPgrasp_TupA

Other DBs

NCBI-GI:

383455836

NCBI-GeneID:

11984476

UniProt:

H8MSG9

Position

4794965..4797148

AA seq 727 aa
MRIALTYNLRLSDSEEEAEFDTQETVNTLAGAIERLGHRLERFEVSGPASRTVARLEAYS
PDLIFNTAEGRRGRFREAFYPALFDELGFAYTGSDAYALALTLDKQLTKLILSKHGIRTP
GWQYVEKLSELQPENLRFPVIVKPNFEGSSKGITQDSVAETLEQVREKVAKALEKYPAGV
LVEEYISGRDLTVPFLAAVDNDYDGVLAPVEYVIDPEASQGRKYAIYDYELKTRREKSVS
VRAPANIPAKMSEDVRTMAQKILQVLDCRDLGRLDFRVSDAGVPYFLEINALPSLEPGAG
IYAAAELEGLHLDGVINSIIQSAGKRHKIRDNKSRQGRPARKSGPLRVGFSFNVKRVKPS
ATAETVQEDSEAEYDSPNTLQAIREAIASWGHEVIDLEATAELPTVLSSTPLDIVFNIAE
GFKGRNRESQVPAMLELLDIPYTGSDPATLSLALDKALAKKIVRQAGILTPNFQLMVTGK
ERLNKEFTTFPLIVKPVAEGSSKGVVTKSVCYSEAELRDVVKEIAGKYQQPALIEEYIGG
REFTVGLLGERRPRVLPPMEIVFLDKAEKNPVYSFQHKLDWTDRIRYDAPAKIEPALLEK
LRTAARNSFMALGCRDVARIDFRMDDKGRIYFIECNPLPGLTPGWSDLVLIAAGAGMDYR
TLIGEIMAPAIRRYKEREARRAQTENPAGTQAPPLNKVVQRIEEQNARANASAPAENTPA
PRPELKS

NT seq 2184 nt +upstreamnt +downstreamnt
atgcgcatcgcgctgacctacaacctgcggctttcggactcggaagaagaggcggagttc
gacacgcaggagacggtgaacacgctggcgggagccatcgagcggctgggccaccgcctg
gagcgcttcgaggtgagcggccccgcgtcgcgcaccgtcgcccgcctggaggcgtacagc
ccggacctcatcttcaacacggcggaggggcgccgcggccgcttccgcgaggccttctac
ccggcgctcttcgacgagctgggcttcgcgtacacgggctcggacgcgtacgcgctggcg
ctcacgctggacaagcagctcaccaagctcatcctctccaagcacggcatccgcacgccg
ggctggcagtacgtggagaagctcagcgagctgcagccggagaacctgcgcttccccgtc
atcgtgaagcccaacttcgagggctcctccaagggcatcacccaggactccgtcgcggag
acgctggagcaggtgcgcgagaaggtggcgaaggcgctggagaagtacccggcgggcgtg
ctggtcgaggagtacatcagcgggcgcgacctcacggtgccgttcctggccgcggtggac
aacgactacgacggcgtgctcgcgccggtggagtacgtcatcgacccggaggcgtcccag
ggccgcaagtacgccatctacgactacgagctgaagacgcgccgggagaagtccgtgtcc
gtgcgcgcccccgcgaacatcccggcgaagatgtccgaggacgtccgcaccatggcgcag
aagatcctccaggtgctggactgccgcgacctgggccggctggacttccgcgtgtccgac
gcgggcgttccgtacttcctggagatcaacgcgctgcccagcctggagccgggcgcgggt
atctacgccgcggcggagctggaagggctgcacctggacggggtcatcaactccatcatc
cagagcgcgggcaagcgtcacaagatccgcgacaacaagagccgccagggcaggcccgcg
cgcaagtccggtccgctgcgcgtgggcttcagcttcaacgtgaagcgcgtgaagcccagc
gccacggcggagacggtgcaggaggacagcgaggccgagtacgactcgcccaacaccctg
caggccatccgcgaggccatcgcctcctggggccacgaggtcatcgacctggaggccacg
gcggagctgcccacggtgctctccagcacgccgttggacatcgtcttcaacatcgcggag
ggcttcaagggccgcaaccgcgagagccaggtgccggcgatgctggagctcctggacatc
ccgtacacgggcagcgaccccgcgacgctgtcgctcgcgctggacaaggcgctggcgaag
aagatcgtccgtcaggcgggcatcctcacgcccaacttccagctgatggtcacgggcaag
gagcgcctcaacaaggagttcaccaccttcccgctcatcgtgaagccggtggcggagggc
agctccaagggcgtcgtcaccaagagcgtctgctactccgaggcggagctgcgcgacgtg
gtgaaggagatcgccggcaagtaccagcagcccgcgctgattgaagagtacatcggcggc
cgtgagttcacggtgggcctcctgggcgagcggcgtccgcgcgtgctgccgcccatggag
atcgtcttcctggacaaggcggagaagaacccggtctacagcttccagcacaagctcgat
tggacggaccgcatccgctacgacgcgcccgcgaagatcgaacccgcgctgctggagaag
ctgcgcacggcggcgcgcaactcgttcatggcgctggggtgccgcgacgtggcgcgcatc
gacttccgcatggacgacaaggggcgcatctacttcatcgagtgcaacccgctgcccggc
ctcactcccggctggagcgacctggtgctgatcgcggcgggtgccggcatggactaccgg
acgctcattggcgagatcatggcgcccgccatccgccgctacaaggagcgcgaggcacgc
cgggcccagacggagaacccggccggtacgcaagcgccgccgctcaataaagtcgtgcag
cggattgaggagcagaacgcgcgggccaatgcgtcggcccccgcggagaacacgcccgcg
ccgcgtccggagctcaagtcctga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (28)   

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