KEGG   Clostridioides difficile CD196: CD196_3338
Entry
CD196_3338        CDS       T00997                                 
Name
(GenBank) putative DNA polymerase III, delta' subunit
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
cdc  Clostridioides difficile CD196
Pathway
cdc03030  DNA replication
cdc03430  Mismatch repair
cdc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cdc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CD196_3338
   03430 Mismatch repair
    CD196_3338
   03440 Homologous recombination
    CD196_3338
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cdc03032]
    CD196_3338
   03400 DNA repair and recombination proteins [BR:cdc03400]
    CD196_3338
Enzymes [BR:cdc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CD196_3338
DNA replication proteins [BR:cdc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CD196_3338
DNA repair and recombination proteins [BR:cdc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CD196_3338
SSDB
Motif
Pfam: DNA_pol3_delta2 DNApol3-delta_C AAA_5 SLC25_like Slx4
Other DBs
NCBI-ProteinID: CBA66746
UniProt: A0A0H3NGG6
Position
complement(3940940..3941875)
AA seq 311 aa
MYFENIIGQDFAKKYLTNSIKKNKLNNAYMFEGMDGIGKKKFADELSKLLLDYENLENSP
DYVLIKPDGNSIKIAQIRNLQSDIVIRPHKDYKIYIINNAEKMTVEAQNALLKTLEEPPN
YAIIILVTNNKESLLETIKSRCDIIKFSPIPIEDLKRYLINTGIEEERAQLLAIFSRGSI
ENALNLSQSSEFSMMREDIQQYIQIMLDKNIVEILNIPNNMEKYRGKIIALLDMMINYFR
DIILLKENVNKNMLINVDKLVFIQNMSGKISYSQLSKIIDIIEDAKSKIKSNCNFNISIQ
VMSLNIYEVIK
NT seq 936 nt   +upstreamnt  +downstreamnt
atgtattttgaaaatattatagggcaagattttgcaaagaaatatttaacaaattctata
aagaaaaataaacttaataatgcgtatatgtttgaaggaatggatggaataggaaaaaag
aaatttgcagatgaattatcaaaactattacttgattatgaaaatctcgaaaatagtcca
gactatgtactcataaaaccagatggaaatagtataaaaatagctcaaatcagaaattta
caatcagatatagtaataagacctcataaagactataaaatatatataatcaataatgct
gaaaaaatgactgtggaagctcaaaatgcacttttaaagacgctagaggaacctccaaac
tatgctataataatcttagtcacaaacaacaaggaatctttattagaaactataaaatct
agatgtgatataataaagttctcacctataccaattgaagacttaaaacgttatttgata
aatacaggtatagaagaagaaagagctcaattattggctattttttcgagaggaagtatt
gagaatgctctaaatctatctcagtcttctgagttttcaatgatgagagaagatatacaa
cagtatattcagataatgttagataaaaacatagtggagattttaaatataccaaacaat
atggaaaaatatagaggtaagattatagctttattagatatgatgataaactattttcga
gatatcatcctattaaaagaaaatgtaaacaagaacatgttaataaatgtagataagcta
gttttcattcaaaatatgagtggaaaaattagttattctcaattgtccaagattattgat
ataatagaagatgcaaagagtaaaataaaaagcaattgcaatttcaatataagcatacaa
gttatgtctttaaatatatacgaggtgattaaatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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