KEGG   Corynebacterium diphtheriae CDCE 8392: CDCE8392_1056
Entry
CDCE8392_1056     CDS       T01700                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
cdd  Corynebacterium diphtheriae CDCE 8392
Pathway
cdd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cdd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CDCE8392_1056 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cdd03400]
    CDCE8392_1056 (uvrB)
DNA repair and recombination proteins [BR:cdd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CDCE8392_1056 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CDCE8392_1056 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_22 UvrD-helicase AAA_16 HEM4 Helicase_RecD AAA_30 DUF87 AIG1 nSTAND3 AAA_5 AAA_7 Apolipoprotein
Other DBs
NCBI-ProteinID: AEX72049
Position
1094344..1096440
AA seq 698 aa
MAFAAEHPELSVSEFRPVGDIERTDARFEVISEYEPAGDQPAAIEELDARLSRGERDVVL
LGATGTGKSATAAWLIEQQQRPTLVMAPNKTLAAQLANELRQLLPNNAVEYFVSYYDYYQ
PEAYIAQTDTYIEKDSSINDDVERLRHRATSSLLSRRDVVVVSSVSCIYGLGTPQSYLDR
SVVLRVDEEVERDRFLRLLVDIQYDRNDVGFTRGTFRVKGDTVDIIPAYEEVAVRVEFFG
DDIDALYYIHPLTGDVIRQVDEVRIFPATHYVAGPERMAKAVEDIKAELRDRLEDLENRG
KLLEAQRLRMRTEYDLEMIEQVGFCSGIENYSRHLDGRPAGSAPATLLDYFPEDFLTIID
ESHVTVPQIGGMFEGDMSRKRNLVEFGFRLPSALDNRPLTWEEFEQRVGQTVYMSATPGD
YELAASGGEYVEQVIRPTGLVDPEIDVRPTRGQIDDLIHEIKQRTTKDERVLVTTLTKKM
AEDLTDYLLENGIRVRYLHSDIDTLQRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLV
AILDADKEGFLRSTKSLIQTIGRAARNVSGTVIMYADKITDSMQYAIDETERRREKQIAY
NKEHGIDPQPLRKKIADILEQVQESKAESTAPSSDAVVVSKTNTSSMPVAELRSLIDDLT
TQMGTAARELKFELAGRLRDEIAELKKELRGMEEIGLA
NT seq 2097 nt   +upstreamnt  +downstreamnt
atggcttttgcggcggaacatccagagttatcggtttcagaatttcgtccggtgggcgat
attgagcgtacagatgcgcgatttgaggtcatctccgaatacgagccggctggtgaccag
ccggcggctattgaggaattagacgcacgattgtcacgtggagaacgagacgttgtttta
ttaggtgccactggcactggtaagtctgcaacggctgcgtggctgattgagcaacaacag
cggcctactcttgtgatggcgcctaacaagacgctagcggcgcaattggcaaatgagcta
cgtcaattgcttcctaataacgcggttgagtacttcgtttcttattacgactattaccag
cctgaagcgtatatcgcgcaaacagatacctatattgaaaaagactcatcaattaacgat
gacgtcgaaaggcttaggcaccgcgccaccagttcgttgttatctcggcgcgacgttgtg
gtggtgtcttcagtttcctgcatttatggtttgggaactccgcagtcatatttggatcgc
tctgttgttttgcgcgtagacgaagaagtcgaacgtgatcgttttctgagactacttgtg
gatattcaatacgatcgcaatgatgttgggtttactcgaggtacgttccgcgtaaaaggt
gacacagtcgatattattcccgcatatgaagaggtcgcggtccgcgttgagttctttggt
gatgatattgatgcgttgtattacatccatcctttaactggagacgttattcggcaggta
gatgaagttcgcatatttcctgcgactcactacgtcgctggaccagaacgcatggcaaaa
gctgtcgaggatattaaagctgagttgcgtgatcgtctcgaagatttggaaaacagaggc
aagcttctagaggcacagcggttacgtatgcgcactgaatatgacctagaaatgatcgag
caggtcggattttgttccgggattgagaactattctcggcatctagacggtcgaccagct
gggtctgcaccggcaacgttgttggattatttccctgaggattttcttacgattatcgac
gagtcccacgtgacggttccgcaaattggcggaatgtttgaaggagacatgtcgcgtaag
cgcaatttggttgaatttggattccggttgccttcagctcttgataatcgtccactaacg
tgggaagaatttgagcaacgcgttggtcaaacggtgtatatgtcggccacgcctggggat
tatgaacttgcggcttcgggcggtgagtacgttgaacaagttattcgacctacaggtctg
gtagatcctgaaattgatgtgcggccaactaggggccaaattgacgatctcattcatgag
atcaaacagaggactactaaagacgagcgtgtattagtaactactctgacaaagaagatg
gccgaagaccttacagattatcttctagaaaatggtattagggtgcgatacctgcattcc
gatatcgatactttgcagcgtgttgagttgctgaggcagctcagattaggggagtatgat
gttctcgttggcatcaacttgttgcgtgagggcttggacttgcctgaggtttctctcgta
gcgattttggacgccgataaagaggggttcctccgatcaactaaatcgttgattcagact
attggccgtgcagcccgaaatgtttcaggcactgtaattatgtacgcagataagatcaca
gattctatgcagtacgcgattgatgagaccgagcggcgtcgagaaaaacagatcgcatac
aacaaagaacacggcattgacccacagccgctacgtaaaaagattgcggatatcttggaa
caggttcaagaaagtaaagcagaaagtacggcaccttcgtccgatgccgtagtcgtttct
aaaacaaatacgtcgtcgatgccggtggcagaattgcgatcgcttatcgacgaccttacg
acccagatgggaacggcagcacgtgaattaaagtttgaattagctggacgtttacgtgat
gaaatcgccgaattgaagaaagaacttcgtggtatggaagaaatagggcttgcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (18)   
   Pfam (18)   
All databases (25)   

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