KEGG   Camelus dromedarius (Arabian camel): 105087448
Entry
105087448         CDS       T04642                                 
Symbol
LSM2
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
cdk  Camelus dromedarius (Arabian camel)
Pathway
cdk03018  RNA degradation
cdk03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cdk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105087448 (LSM2)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105087448 (LSM2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cdk03019]
    105087448 (LSM2)
   03041 Spliceosome [BR:cdk03041]
    105087448 (LSM2)
Messenger RNA biogenesis [BR:cdk03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105087448 (LSM2)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     105087448 (LSM2)
Spliceosome [BR:cdk03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    105087448 (LSM2)
 Complex C
  U2 snRNP components
    105087448 (LSM2)
SSDB
Motif
Pfam: LSM SM-ATX DYW_deaminase
Other DBs
NCBI-GeneID: 105087448
NCBI-ProteinID: XP_010976413
Position
20:22272164..22276846
AA seq 95 aa
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEALQQKQ
NT seq 288 nt   +upstreamnt  +downstreamnt
atgctcttctattcctttttcaagtcccttgtgggcaaggacgtggtcgtggaactcaag
aatgacctgagcatctgtggaaccctccattctgtggatcagtatctcaacatcaaactg
actgacatcagtgtcactgaccctgagaaataccctcacatgttatcagtgaagaactgc
ttcatcaggggctcagtggttcgctatgtgcagttaccagcagatgaggtggacacacag
ttgctacaggatgcagcaaggaaggaggccctgcagcagaaacagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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