KEGG   Camelus dromedarius (Arabian camel): 105087618
Entry
105087618         CDS       T04642                                 
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X1
  KO
K11647  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cdk  Camelus dromedarius (Arabian camel)
Pathway
cdk03082  ATP-dependent chromatin remodeling
cdk04714  Thermogenesis
cdk05225  Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:cdk00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    105087618 (SMARCA4)
 09150 Organismal Systems
  09159 Environmental adaptation
   04714 Thermogenesis
    105087618 (SMARCA4)
 09160 Human Diseases
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    105087618 (SMARCA4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cdk03021]
    105087618 (SMARCA4)
   03036 Chromosome and associated proteins [BR:cdk03036]
    105087618 (SMARCA4)
Transcription machinery [BR:cdk03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     105087618 (SMARCA4)
Chromosome and associated proteins [BR:cdk03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    REST complex
     105087618 (SMARCA4)
  Chromatin remodeling factors
   BAF complex
    105087618 (SMARCA4)
   PBAF complex
    105087618 (SMARCA4)
   GBAF(ncBAF) complex
    105087618 (SMARCA4)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C SnAC Bromodomain HSA BRK QLQ ResIII HDA2-3 DEAD DUF2009
Other DBs
NCBI-GeneID: 105087618
NCBI-ProteinID: XP_031293088
Position
22:complement(6781274..6862205)
AA seq 1669 aa
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG
PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGLRSGGHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP
GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG
LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG
PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES
GSEEEEEEEEEEQPQPAQPPALPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV
SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE
MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA
RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH
YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE
TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD
GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG
KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK
TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR
VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR
HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD
LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS
DSLTEKQWLKKDERKYIQDTVNKKMSRDLTLKAIEEGTLEEIEEEVRQKKSSRKRKRDSD
AGPSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSG
RQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQT
FNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIK
LGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED
NT seq 5010 nt   +upstreamnt  +downstreamnt
atgtccactccagacccacccctgggtggaactcctcggccaggcccttctccaggcccg
ggcccctccccaggagccatgttgggccctagcccgggtccctcacctggctccgcccac
agcatgatggggcccagcccggggcctccctcagcaggacaccccatcccgacccagggc
cctggagggtaccctcaggacaacatgcaccagatgcacaagccgatggagtccatgcac
gagaagggcatgtcggatgacccccgctacaaccagatgaaggggatgggactgcggtca
gggggccatgcaggcatggggcccccgccgagccccatggaccagcactctcaagggtac
ccctcacccctggggggctctgagcacgcctccagtccggttccagccagtggcccatcc
tcgggcccacagatgtcgtccggaccaggaggggcccctctggatggcgccgacccccag
gctttggggcagcagaaccggggcccgaccccatttaaccagaaccagctgcaccagctc
agagctcagatcatggcatacaagatgctggcccgggggcagcccctccctgaccacctg
cagatggcggtgcaggggaagcggccgatgcccgggatgcagcagcagatgccaacacta
cctccaccctccgtgtccgcaacaggacctggccctggccctggccctggccctgggcca
ggtccgggaccagcacctccaaattacagcaggcctcatggtatgggagggcccaacatg
ccccccccaggaccctcaggcgtgccccccgggatgcctggccagccccccggagggcct
cccaagccctggcctgaaggacccatggcgaatgctgctgctcccacgagcacacctcag
aagctgatacccccgcagccgacgggtcgcccctcacctgcaccccccgccgtcccgccg
gctgcctccccggtgatgccgccccagacacagtcgccggggcagccggcccagcccgcc
cccatggtgccgctccaccagaagcagagccgcatcacccctatccagaagccacggggc
ttggacccggtggagatcctgcaggagcgggagtacaggctacaggctcgcatcgcacac
cgaattcaggaacttgaaaaccttcccgggtccctagccggggatttgcgtaccaaagcg
accatcgagctcaaggccctcaggctgctgaacttccagaggcagctgcggcaggaggtg
gtggtgtgcatgaggagggacacagctcttgaaacggccctcaatgccaaggcctacaag
cgcagcaagcggcagtcactgcgtgaggcccgcatcaccgagaagctggagaagcagcag
aagatcgagcaggagcgcaagcgccggcagaagcaccaggaatacctcaacagcattctt
cagcatgccaaggatttcaaagaatatcacaggtcggtcacaggcaagatccagaaactc
accaaggcggtggccacctaccatgccaacacagagcgggagcagaagaaggaaaacgag
agaatcgagaaggagaggatgcggcggctcatggccgaagacgaggaagggtaccgcaag
ctcatcgaccagaagaaggacaagcgcctggcctacctcttgcagcagacagacgagtac
gtggctaacctcacggagctggtgcggcagcacaaggccgcccaggtcgccaaggaaaag
aagaagaaaaagaaaaagaagaaggcagaaaacgcagaaggacagacacctgcaattgga
cctgacggcgagcctctggatgagaccagccaaatgagtgacctacctgtcaaggtgatc
catgtggagagtgggaagatcctcaccggcacagacgcgcctaaagcagggcagctagag
gcctggctggagatgaaccctgggtatgaagtagctccaagatctgatagtgaagagagt
ggctccgaagaagaggaggaggaggaagaggaggagcagccgcagccagcgcagcctccc
gccctgcctgtggaggagaagaagaagattccagatccagacagcgacgatgtctctgag
gtggacgcccggcacatcattgagaatgccaagcaagacgtcgatgacgagtatggtgtg
tcacaggccctcgcccgcggcctgcagtcctattatgccgtggcccatgccgtcaccgag
agggtggataagcagtcagcgctgatggtcaacggcgtcctcaagcagtaccagatcaaa
ggcttagagtggttggtgtccctctacaacaacaacctgaacggcatcctggccgacgag
atgggcctggggaagaccatccagaccatcgccctcatcacgtacctcatggagcacaag
cggatcaacggacccttcctcatcatagtacctctctcaacactgtccaactgggcatac
gagtttgacaagtgggccccttccgtggtgaaggtgtcctacaagggctctccggcagcc
agacgtgctttcgtcccccagctccggagtggcaagttcaatgtcttgctcacaacgtac
gagtacatcattaaggacaagcacatcctcgcgaagatccgttggaagtacatgatcgtc
gacgagggccaccgcatgaagaaccaccactgcaagctgacacaggtcctcaacacgcac
tatgtggccccccgccgcctgctgctgacaggcacgccgctgcagaacaagctgcccgag
ctctgggcgctcctcaacttcctgctgcccaccatcttcaagagctgcagcaccttcgag
cagtggttcaacgcgcccttcgccatgaccggggagaaggtggacctgaacgaggaggag
accattcttatcatccgtcgtctccacaaagtgctgcggcccttcctgctccggcggctc
aagaaggaagtcgaggctcagttgcctgagaaggtggagtacgtcatcaagtgtgacatg
tccgccctgcagcgcgtgctctaccggcacatgcaggccaagggggtgctgctgactgat
ggctccgagaaggacaagaagggcaaaggcggcaccaagaccctaatgaacaccatcatg
cagctgaggaagatctgcaaccacccatacatgttccagcacatcgaggagtccttttcc
gagcacttggggtttaccggcggcatcgtccaaggactggacctgtaccgagcctccggg
aaatttgagctgctcgacagaattcttcccaaactccgcgccaccaaccataaagtgctg
ctgttctgccagatgacctccctcatgaccatcatggaagactattttgcttatcgtggc
tttaaatacctcaggcttgatggcaccacaaaggcggaggaccggggcatgctgctgaaa
accttcaatgagcctggctctgagtacttcatcttcctgctcagcacccgggccgggggg
ctcggcctgaacctccagtcggccgacactgtgatcatatttgacagtgactggaacccc
caccaggacctgcaagcacaggaccgtgcccaccgcatcgggcagcagaatgaggtgcgc
gtgctccgcctctgcacggtcaacagcgtggaggagaagattctggctgcggccaagtac
aagctcaacgtcgaccaaaaggtgatccaggccggcatgttcgaccagaagtcctccagc
cacgagaggcgcgcattcctgcaggccatccttgagcacgaggagcaggacgagagcaga
cactgcagcacgggcagcggcagtgccagcttcgcccacactgcccctccgccagcgggc
gtcaaccccgacttggaggagccacctctaaaggaagaagacgaagtgcctgacgacgag
acagtgaaccagatgattgcccggcatgaggaggagttcgacctgttcatgcgcatggac
ctggaccgcaggcgcgaggaggcccgcaaccccaagcggaagccacggttgatggaggag
gacgagctcccctcgtggatcatcaaggatgacgccgaggtggagcggctgacctgcgag
gaggaggaggagaagatgttcggccgcggctcccgccaccgcaaggaggtggactacagc
gactcgctgaccgagaagcagtggctcaagaaagacgagaggaaatatatccaggacaca
gtaaacaaaaagatgagtcgtgacctgaccctgaaggccatcgaggagggcacgctggag
gagatcgaagaggaggtccggcagaagaagtcgtcacggaagcgcaagcgggacagtgat
gccggcccctccaccccgaccaccagcacccgcagccgcgacaaggacgacgagagcaag
aagcagaagaagcgcggccggccacccgccgagaagctctcccccaacccacccaacctc
accaagaagatgaagaagatcgtggatgccgtcatcaagtacaaggacagcagcagtgga
cgtcagctcagcgaggtgttcatccagctgccctcccgcaaggagctgcccgagtactat
gaactcatccgcaagcccgtggacttcaagaagatcaaggagcgtatccgcaaccacaag
taccgcagcctcaacgacctggagaaggacgtcatgctgctgtgccagaatgcgcagacc
ttcaacctggagggctccctgatctacgaagactccattgtcctgcagtcagtcttcacc
agtgtgcggcagaaaatcgagaaggaggacgacagtgaaggcgaggagagcgaggaggag
gaggagggcgaggaggaaggctccgagtccgagtcgcgctcagtcaaagtgaagatcaag
ctcggccggaaggagaaggcccaggatcgactgaaggggggccggcggcggccaagccga
gggtccagggccaagccagtggtgagcgacgacgacagtgaggaggagcaggaggaggac
cgctcaggaagtggcagcgaggaagactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (11)   
   Pfam (11)   
All databases (30)   

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