KEGG   Camelus dromedarius (Arabian camel): 105089341
Entry
105089341         CDS       T04642                                 
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
  KO
K10754  replication factor C subunit 1
Organism
cdk  Camelus dromedarius (Arabian camel)
Pathway
cdk03030  DNA replication
cdk03410  Base excision repair
cdk03420  Nucleotide excision repair
cdk03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cdk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105089341 (RFC1)
   03410 Base excision repair
    105089341 (RFC1)
   03420 Nucleotide excision repair
    105089341 (RFC1)
   03430 Mismatch repair
    105089341 (RFC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cdk03032]
    105089341 (RFC1)
   03400 DNA repair and recombination proteins [BR:cdk03400]
    105089341 (RFC1)
DNA replication proteins [BR:cdk03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    105089341 (RFC1)
DNA repair and recombination proteins [BR:cdk03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     105089341 (RFC1)
SSDB
Motif
Pfam: RFC1 BRCT AAA PTCB-BRCT Rad17 AAA_22 BRCT_2 RuvB_N AAA_5 AAA_14 AAA_17 AAA_16 AAA_7 AAA_33 nSTAND3 Zeta_toxin AAA_18 AAA_30 RNA_helicase NTPase_1
Other DBs
NCBI-GeneID: 105089341
NCBI-ProteinID: XP_010978690
Position
2:94666536..94729901
AA seq 1146 aa
MDIRKFFGVVPSGKKLVSETVKKNEKKSAEETLKAKRGIKEIKVNSSCKDDDFRQKQPNK
KKRIIYDSDSESEETMQVKNTKKQPEKLPLTSKPAKIRHQDPVTYISETDEEDDFVCKKA
ASKSKENGGSTNSYLGASNMKKNEEYTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSDKKM
VASRRKEPPQNADDSRLKDEAIARQLQLDEDAELERQLHEDEEFARTLAMLDEEPKSKKA
LKDPEEREMFSSVQANLCKAVKPKYPHKVKAEQFSDERKNCSPKKRTKCESSKESQHSRS
SAHKTGETSSPKASSKLAALKKREESSYKKTEPLGSKRKENAIELKETRTPKKIKSSPAK
QESISPEDSEKRRSNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESIER
DEAKSLIERYGGKVTGNVSKKTNYLVRGRDSGQSKSDKAAALGTKIIDEDGLLNLIRTMP
GKKSKYEIAAEAEMKKEKSKLERTPQKNDRGKRKISPTKKESESKKCQLTPQRESSIKSI
KKETSVFRRGLDFKEQVAEETNGDSRARNLADDSSENKVENLLWVDKYKPTSLKTIIGQQ
GDQSCANKLLRWLQNWHKSPSEDKKCAAKVGKFAGKDDGSSFKAALLSGPPGVGKTTTAS
LVCQELGYSYVELNASDTRSKNSLKEIVAESLNNTSIKGFCSTGAVHSVSMKHAVLMDEV
DGMAGSEDRGGIQELIALIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKG
AMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKK
DIKLGPFDVARKVFAAGEETAHMSLMDKSDLFFHDYSIAPLFVQENYIHVKPVAAGGDMK
KHLMLLSRAADSICDGDLVDRQIRNKQNWSLLPTQAIYASVLPGELMRGYMTQFPTFPSW
LGRHSSMGKHDRIVQDLALHMSLRTYSSKRTVNVDYLSHIRDALVQPLTSQGIEGVQDVV
ALMDAYYLMKEDFENIMEISSWGGRPSPFSKLDPKVKAAFTRAYNKEVHLTPYSLQVVKT
HRLSTGPALDSEYNEELNEDDSQSDEKDQDTLETDAMIKKKTKSSKPSKSEKDKESRKGK
GKNSKK
NT seq 3441 nt   +upstreamnt  +downstreamnt
atggatattcggaaattctttggggttgtaccaagtggaaagaaacttgtaagtgaaaca
gtaaagaagaatgagaaaaagtctgctgaagaaactttaaaagcaaagagaggaataaag
gaaatcaaggtaaatagttcctgtaaagatgatgacttcagacagaagcaaccaaacaag
aaaaagaggatcatttatgattcagattcagaatcagaggaaacaatgcaggtaaaaaac
accaaaaagcaaccagaaaaattgccactgacttctaaacctgctaaaattagacaccag
gatcccgttacatacatttcagaaacagatgaagaagatgactttgtgtgtaagaaggca
gcctccaaatcaaaagagaacggaggatctacaaatagttaccttggagcatcaaacatg
aaaaagaatgaagaatacactaagactaagaataagcctttatcaccgataaagcttact
cctacatcagtgcttgattattttggaactggaagtgtccaaagatccgataagaagatg
gtggcaagcagaagaaaagagcctccacaaaatgcagatgattccagattaaaagatgaa
gctattgccaggcaattgcaacttgacgaagatgcagagctggagagacaactgcatgaa
gatgaagagtttgccagaacgttagccatgttggatgaagaacccaagtccaaaaaggct
ctaaaggacccagaagagagagagatgttttcatctgtacaggccaatttatgtaaagca
gtcaaacctaaatatcctcataaagtaaaagcagaacaattttcagatgaaagaaagaat
tgcagtcctaagaagcgaactaaatgtgaaagttcaaaagaatctcaacattctaggtca
tcagctcataaaacaggagaaacttcttctccaaaagccagttccaagctggcagctttg
aaaaaaagagaagagagttcttataaaaaaacagagcctttgggctcaaaaagaaaagaa
aatgccattgaactgaaagagaccagaactcctaagaaaatcaaaagttctccagctaaa
caagagtctataagtcctgaagattctgaaaagagacgcagtaattatcaagcttatcgg
agctacttaaatcgagaaggtcccaaagccctgggctccaaagaaataccaaagggagct
gaaaattgcttggaaggccttacatttgtaatcacaggagtgctggagtccattgaacga
gacgaggccaagtctctaattgagcgttatgggggaaaagtaacaggaaatgtcagcaag
aagacaaattaccttgtcaggggtcgcgacagtggtcagtccaagagtgataaggcagcc
gccttgggaacaaaaattattgatgaagatggcctattgaatctgattcgaaccatgcca
gggaagaagtccaagtatgaaatagcagctgaagctgagatgaagaaagaaaaatccaaa
ttggaaagaacaccccaaaaaaatgaccgaggaaaaagaaaaattagtccaactaagaag
gaatcagaatctaaaaagtgccagctgactccccagagagaaagctctataaagtcaata
aaaaaagaaacaagtgtgtttcggagaggcctggacttcaaggagcaggtggctgaggag
acaaatggtgacagccgggctaggaatttggctgatgacagcagtgaaaacaaagtggaa
aatttgctctgggtggataaatataagccaacctcgctcaagaccataattggacagcaa
ggtgaccagagctgtgccaacaaactcctacgctggctccaaaactggcacaagagtcca
tcagaagataagaaatgcgcagcaaaggttggtaaatttgcaggcaaagatgatggctcc
agttttaaagctgcattgctctcaggccctccaggtgttggcaaaacaaccacagcttct
ctagtttgtcaggaattgggatatagctacgtggaactgaatgcaagtgacactcggagt
aagaacagtttgaaggagattgttgctgaatcgttgaataataccagcatcaaaggcttt
tgttcaactggagcagtccactcagtaagcatgaaacacgctgtcctcatggatgaggtc
gatggcatggcaggcagtgaggacaggggaggaattcaggaattaattgccctaataaaa
catacaaaaattcctattatttgtatgtgcaatgatagaaatcatcccaagattcgctct
ttggttcattattgttttgatcttcgttttcaaagacctcgggttgagcagattaagggt
gctatgatgtctattgcatttaaagagggtttaaagatccctcctccagctatgaatgaa
ataattttgggagctaatcaagatatcagacaggttttacacaatctgagtatgtggtgt
gcacgaagtaaggcactaacttacgaccaggccaaggctgattctcacagagccaaaaag
gatatcaaactgggcccatttgatgttgcccggaaagtgtttgcagctggagaggagact
gctcatatgtcacttatggacaaatcagatctcttttttcatgattattcaatagcaccc
ctctttgtccaggagaactacatacacgtgaagcccgtagctgcagggggtgacatgaaa
aagcacttgatgcttttaagcagagcagcagatagcatatgtgatggtgacctagtggac
cggcagatccggaataagcagaactggagtcttctgcccacacaggccatttatgccagt
gttcttcctggagagttaatgagagggtacatgacccagtttcccacctttccaagctgg
ttggggaggcactcatctatgggcaaacatgatcgtattgttcaggacctagcactgcat
atgagtctcagaacttactccagcaaaaggactgtaaacgtggattatctgtcacatata
agggatgcacttgtacagcccttgacctcacaagggatagaaggagtacaggatgttgtt
gctcttatggacgcatattatttgatgaaagaagactttgagaatatcatggaaattagc
agctggggaggcagacctagtcccttctccaagctggatcccaaggtgaaagcagccttc
acaagagcttacaataaggaagtccaccttactccatattcacttcaggtagtaaagaca
cacagactcagcacaggcccagcactggattctgaatacaacgaagagttaaatgaagat
gactctcaatctgatgagaaagaccaggacactttggaaactgatgctatgatcaagaaa
aagacaaaatcttcaaagccttcaaaatcagaaaaagataaggaatccagaaaaggaaaa
ggaaaaaattcaaagaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (20)   
   Pfam (20)   
All databases (42)   

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