KEGG   Camelus dromedarius (Arabian camel): 105090110
Entry
105090110         CDS       T04642                                 
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50 isoform X1
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
cdk  Camelus dromedarius (Arabian camel)
Pathway
cdk03440  Homologous recombination
cdk03450  Non-homologous end-joining
cdk04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:cdk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    105090110 (RAD50)
   03450 Non-homologous end-joining
    105090110 (RAD50)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    105090110 (RAD50)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cdk03032]
    105090110 (RAD50)
   03400 DNA repair and recombination proteins [BR:cdk03400]
    105090110 (RAD50)
DNA replication proteins [BR:cdk03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    105090110 (RAD50)
DNA repair and recombination proteins [BR:cdk03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     105090110 (RAD50)
    BRCA1-C complex
     105090110 (RAD50)
   NHEJ (non-homologous end-joining)
    MRX complex
     105090110 (RAD50)
SSDB
Motif
Pfam: AAA_23 Rad50_zn_hook AAA_21 SbcC_Walker_B SMC_N Crescentin AAA_29 DUF2703 AAA_15 POTRA_3
Other DBs
NCBI-GeneID: 105090110
NCBI-ProteinID: XP_010979607
Position
3:95056866..95267025
AA seq 1312 aa
MSWIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELVAVQRSMVCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKIKECQTELKYLKQNKEKACEIRDQITSKEAQLTSSKEI
VKSYENELDSLEDRLKEIEQNLSKIMRLDNEIKALDSRKRQMEKDNSELEQKMEKVFQGT
DEQLNELYHNHQRTVREKERRLIDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRH
QEHIRARDSLIQSLAAQLELDGFERGPFSERQIKNFHKLVRERQEREAETASQLINDFAE
KETLKQKQIDEIRDKKTGLGRIIELKSEILSKKQNELKNVKYELQQLEGSSDRILELDQE
LTKTERELSKAEKNSNIETLKTEVISLQNEKADLDRILRKLDQEMEQLNHHTTTRTQMEM
LTKDKADKDEHIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHINNELKRKEEQLSNYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMP
EEESAKVCLTDVTLMERFQMDLKDVERKIAQQAAKLQGLALDRTVQQVNQEKQEKQHKLD
TVSSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQS
LHREIKDAKEQVSPLETTLEKFQQEKEELINKKNTSNKIAQDKINDIKEKVKNIHRYVKD
IENYIQDGKDDYKKQKENELDKVIAQLSECEKHKEKINNEMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEEKKENIKRNHGLAIGRQHG
YEEAIIRFKKELQEPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRNTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEIVKCSVSSLGSWVH
NT seq 3939 nt   +upstreamnt  +downstreamnt
atgtcttggatcgaaaagatgagcattctgggagtgcggagttttggaatagaggacaaa
gataagcaaattattactttcttcagccccctcacaattttggttggacccaatggggct
ggtaagacgaccatcattgaatgtctaaaatatatttgtactggagatttccctcctgga
accaaaggaaatacatttgttcatgatcccaaggttgctcaagaaacggatgttagagct
cagattcgtctgcagtttcgtgatgtgaatggagaacttgtagctgtgcagagatctatg
gtgtgtactcagaaaagcaaaaagacagaatttaaaaccctagaaggagtcattactaga
acaaagcatggcgaaaaagtcagtctcagctccaagtgtgcagaaattgaccgagagatg
ataagttcccttggggtttccaaatctgtgctaaataatgtcattttctgtcaccaagaa
gattctaattggcctttaagtgaaggaaaggctttgaagcaaaaatttgatgaaattttt
tcagcgacaaggtacattaaagccttggaaacacttcggcaggtacgtcagacacaaggt
cagaaaataaaggaatgtcaaacagaactaaaatatctgaagcagaataaggaaaaagct
tgtgagattcgtgatcagattactagcaaggaagcccagttaacatcttcaaaggaaatt
gtcaaatcttatgagaatgaacttgattcactggaggatcgtctaaaagaaattgaacaa
aatctctctaaaatcatgagacttgacaatgaaattaaagccttggatagccggaagagg
cagatggaaaaagataatagtgaactggagcagaaaatggaaaaggtttttcaagggact
gatgagcaactaaatgagttatatcacaatcatcagagaacagtaagggagaaagaaagg
agactgatagactgtcagcgtgaactggaaaaattaaataaagaatctaggcttctcaat
caagaaaaatcagaactacttgttgaacagggtcgtctacagctacaggccgatcgtcat
caagaacatattcgagctagagattcattgattcagtctttggcagcacaactagaattg
gatggctttgagcgtggaccattcagtgaaagacagataaaaaattttcacaaacttgtg
agagagaggcaagaaagggaagcagaaaccgccagccaactgataaatgactttgcagaa
aaagagacactgaaacaaaaacagatagatgagataagagataagaaaactggactggga
agaataattgagctaaaatcagaaatcctaagtaagaagcagaatgagctgaaaaatgtg
aagtatgaattacagcagttggaaggatcttcagacaggattcttgaactggaccaggag
ctcacaaaaactgaacgtgagctaagcaaggctgagaaaaacagcaacatagaaactcta
aaaacagaagtaataagccttcaaaatgagaaagcagacttagacaggatcctgcgtaaa
ttggaccaggagatggagcagttaaaccatcatacaacaacacgcacccagatggagatg
ctgaccaaagacaaagctgacaaagatgaacatatcagaaaaataaagtctaggcacagt
gatgaattaacttcattgctagggtattttcccaacaaaaaacagctcgaagactggctt
catagtaaatcaaaagaaattaatcagaccagggacagacttgccaaactgaacaaggaa
ctagcttcagctgagcaaaataaaaatcatataaataatgagttaaaaaggaaggaagag
cagttatccaactatgaagacaagctgtttgatgtctgtggtagccaagatttcgaaagt
gatttagacaggcttaaagaggaaattgaaaaatcctcaaaacaacgagccatgttggct
ggagccacggcagtttactcccaattcattactcagcttacggatgaaaaccagtcgtgt
tgccctgtctgtcagagagtttttcagacagaagctgaattacaagaagtcatcagtgat
ttgcagtctaagctgcggcttgctccagataaactcaagtcaacagaatcagagctaaag
aaaaaagaaaagcggcgtgatgaaatgctgggacttgtgcccatgaggcaaagcataatt
gatttgaaagagaaggaaataccagaattaagaaacaaactgcagaatgtcaatagagac
atacagcgcctaaagaatgacatagaagaacaggaaacactcctgggtacaataatgcct
gaagaggaaagtgctaaagtgtgtctgacagatgttacacttatggagaggtttcagatg
gatcttaaagatgttgaaagaaaaattgcacaacaagcagctaagctacagggactagcc
ttggatagaactgttcagcaagtaaaccaggaaaaacaagaaaaacaacacaaattagat
acagtttccagtaagattgaattgaatcggaagcttatacaggaccagcaggaacagatt
caacacctgaaaagtacaacaaatgaacttaaatcagagaaacttcagatatccactaat
ttacaacgtcgtcagcaattggaggagcagactgtggaattatccactgaagttcagtcc
ttacacagagagataaaggatgctaaagagcaagtaagccctttggaaacaacactggaa
aagttccagcaggagaaagaagaattaatcaacaaaaaaaatacaagcaacaaaatagca
caggataaaataaatgatatcaaagagaaggttaaaaatattcatcgttatgtgaaagac
attgagaattacattcaagatggaaaagatgactataagaagcaaaaagaaaatgaactt
gataaagtaatagctcaactaagtgaatgtgagaaacacaaagaaaagattaataatgaa
atgggaatcatgagacaagacattgatacacagaagatacaagaaagatggctacaggat
aaccttactttaagaaaaagaaacgaagaactaaaagaagttgaagaagaaagaaaacaa
catttgaaggaaatgggtcaaatgcaggttttacaaatgaaaaatgaacatcagaagttg
gaagaaaaaaaagaaaatataaaaagaaatcatggtttggcaataggacgacagcatggt
tatgaggaagcaattattcgttttaagaaagaacttcaagaacctcaatttcgggatgct
gaagaaaagtatagggaaatgatgattgttatgagaacaacagagcttgtgaacaaggat
ctggacatttactataagacccttgaccaagcaataatgaaatttcacagtatgaaaatg
gaagaaatcaacaaaattattcgtgacctttggcgaaatacctatcgtgggcaagatatt
gaatatatagaaattcgatctgatgccgatgaaaatgtatcagcttctgataaaagacgg
aattataactaccgagtggtgatgctaaagggagacacagccttggatatgcgaggacga
tgcagtgccggacaaaaggtattagcctcactcatcatccgcctggccctggctgaaaca
ttctgcttaaactgtggcatccttgccttggatgagccaacaacaaatcttgaccgagaa
aacattgaatctcttgcgcatgctctggttgagataattaaaagtcgctcacagcagcgt
aacttccagcttctggtaatcactcacgatgaagattttgtggagctcttagggcgttct
gaatatgtggagaaattctacaggattaagaagaacattgatcagtgctcagagatcgtg
aaatgcagcgttagctccctaggatcttgggttcattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (10)   
   Pfam (10)   
All databases (30)   

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