KEGG   Camelus dromedarius (Arabian camel): 105103305
Entry
105103305         CDS       T04642                                 
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
  KO
K11407  histone deacetylase 6 [EC:3.5.1.98]
Organism
cdk  Camelus dromedarius (Arabian camel)
Pathway
cdk04613  Neutrophil extracellular trap formation
cdk05014  Amyotrophic lateral sclerosis
cdk05034  Alcoholism
cdk05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:cdk00001]
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    105103305 (HDAC6)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    105103305 (HDAC6)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    105103305 (HDAC6)
  09165 Substance dependence
   05034 Alcoholism
    105103305 (HDAC6)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cdk01009]
    105103305 (HDAC6)
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cdk03019]
    105103305 (HDAC6)
   04131 Membrane trafficking [BR:cdk04131]
    105103305 (HDAC6)
   03036 Chromosome and associated proteins [BR:cdk03036]
    105103305 (HDAC6)
Enzymes [BR:cdk01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     105103305 (HDAC6)
Protein phosphatases and associated proteins [BR:cdk01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     105103305 (HDAC6)
Messenger RNA biogenesis [BR:cdk03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     105103305 (HDAC6)
Membrane trafficking [BR:cdk04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    105103305 (HDAC6)
Chromosome and associated proteins [BR:cdk03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     105103305 (HDAC6)
SSDB
Motif
Pfam: Hist_deacetyl zf-UBP zf-UBP_var
Other DBs
NCBI-GeneID: 105103305
NCBI-ProteinID: XP_031301121
Position
X:complement(82265999..82292965)
AA seq 1125 aa
MTSTGQDPTTTRPRRSRHSPHSPPHDSSVTLKRGVKKGAALRSSPNLAEVKKKGRMKKLN
QAAEQDLIVGLQGLDLNLEARTLFGTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLI
QEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRGLADTYDSVYLHPNS
YTCACLASGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQ
KHDIQRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASDWSTTGFGQG
QGYTINVPWNQVGMRDADYIAAFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATP
AGFAQLTHLLMGLAGGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPMLEFPGAPCRSA
QTSVSCALEALEPFWEVLVRSAETPEEEDTVEEEDVEEKEEEGLWQPPELPILTWPVLQA
RTGLVYDQQMMDHHSMWDSHHPEMPQRIQRIMRRLEELGLARRCLALPARPATDAELLTC
HSAEYMERLRATEKMKTRELHRESANYDSIYICPSTFACAQLATGAVCRLVEAVLAGEVL
NGIAVVRPPGHHAERDAACGFCFFNSVAVAARHAQAISGHALRILIVDWDVHHGNGTQHI
FEEDPSVLYISLHRYDHGTFFPMGDEGASSQVGQAAGTGFTVNVAWNGSRMGDTDYLAAW
HRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLANGRIILILE
GGYNLTSISESMAACTRSLLGDPLPMLTLLRPPLSGALASITETIQVHRRYWRSLRVMKV
EDKEGPSSSELITKKSPQPAHPGSAKGLTMPEGNILDAGLGKATSASSVKESASETAVVK
LTQDQSSEAAIGGATLDQTTSEEATGGAEPIQNPPASCPVNQTPPTSPVQGATTQEQSPS
KLIGNLRTLELDSEPQEPPEEKGLLGEAAGGQNTDESVLTQVFGDHADTDQVMFYAVTPL
PWCPHLVAVCPTPEAGLSVTQPCQDCGTHQENWVCLSCYQVYCGRYVNGHMLQHHEGSGH
PLVLSYADLSAWCYCCQAYVHHEALLAMKNIAYQNKFGEDLPHSH
NT seq 3378 nt   +upstreamnt  +downstreamnt
atgacctccactggccaggatcccaccacaaccaggccgcgaaggagtaggcacagcccc
cactcgccccctcacgattccagcgtcaccttgaagcgaggtgttaagaagggtgctgca
ctccgctccagccctaatctagcggaggtaaagaagaaaggcagaatgaagaagcttaac
caagcagctgagcaagacctaatcgtggggctgcaaggactggatctgaaccttgaggcc
aggacactgtttggcactggcttggtgtttgatgagcagctcaatgaattccactgcctc
tgggatgacagcttccctgaaggccccgagcggctccatgccatcaaggagcagctgatc
caggagggcctcctggaccgctgcgtgtcctttcaggcccggttcgccgaaaaggaggag
ctgatgttggttcacagcctagaatacattgatctgatggagacaacccagtacatgaat
gagggggaactccgcggcctagcagacacctatgactcagtttatctgcatccgaactca
tacacctgtgcctgcctggcctcaggctccgtcctcaggctggtggatgcagtcctgggg
gctgagatccggaatggtatggctatcatcagacctcctggacaccatgcccagcacagt
cttatggatgggtattgcatgttcaaccacgtagccgtggctgcccgctatgctcaacag
aagcatgacattcagagggtccttatcgtggattgggatgtacaccatggtcaagggaca
cagttcacttttgaccaagaccccagcgtcctctatttctccatccaccgctacgagcag
ggtaggttctggcctcaccttaaggcctctgactggtccaccacaggttttggccaaggc
cagggatacaccatcaatgtgccttggaaccaggtggggatgcgagatgctgactatatt
gccgctttcctgcacgtcctgctgccagttgcccttgagttccagccacagctggtcctg
gtagctgctggttttgatgccctccaaggggaccccaagggcgagatggccgccactccg
gcagggttcgcccagctgacccacctactcatgggtctggcaggaggcaagctgatcctc
tcgctggagggtggctacaacctccgctccctggctgaaggtgtcagcgcctcgctccac
acccttctgggagacccttgtcccatgctggagttcccgggcgccccctgccggagtgcc
cagacttctgtctcctgcgccctggaagccctggagcccttctgggaggtcctggtgaga
tcagctgagaccccagaggaggaggacaccgtggaggaggaagatgtggaggagaaggag
gaggagggactgtggcagccccctgagctcccaattctgacatggccagtgctgcaggct
cgcacagggctggtctacgaccaacagatgatggatcaccacagcatgtgggacagccac
caccccgagatgcctcagcgcatccagcgtatcatgcgccgtctggaggagctgggcctt
gccaggcgctgcctggccctgcccgcacgtcccgccacggatgctgagctgctcacctgc
cacagtgcggagtacatggagcgtctacgggccacggagaagatgaaaacccgggagctg
caccgcgagagtgccaactatgactccatctacatctgccccagcaccttcgcctgcgcg
cagctggccactggggccgtgtgccgcctggtagaggctgtgctggcgggagaggttttg
aatggtattgccgtggttcgtccccctggacaccatgcagagcgggatgctgcttgcggt
ttctgctttttcaactcagtggctgtggctgctcgccatgcccaggccatcagtgggcat
gcgctgcggatcttgattgtggactgggatgtccatcacggtaatggaactcagcacata
tttgaggaggaccccagcgtgctctacatttccctgcaccgctatgatcatggtaccttc
ttccccatgggggatgagggtgccagcagccaggtaggtcaggctgcaggcactggcttc
accgtcaacgtggcctggaatgggtcccgcatgggtgacaccgactacctggctgcctgg
catcgtctggtgcttcccattgcctatgagtttaacccagagctggtgctggtctcagct
ggctttgacgctgcccggggggacccgctgggtggctgccaggtgtcgcctgagggctat
gcccacctcacccacctgctgatgggcctggccaatggccgcattatcctgatcctagag
ggtggctataatctgacatccatctcggagtccatggctgcctgcacccgttccctcctt
ggggatccactccccatgctgaccctcctgcggcccccactatcaggggcccttgcctcg
atcactgagaccatccaagtccatcgcagatactggcgcagcttgcgggtcatgaaggtc
gaagacaaagagggaccctccagttctgagttgatcaccaagaagtcaccccaaccagca
catcctgggtcagccaaggggttgaccatgccagaagggaacattctggatgcaggcctg
ggaaaggccacctcagcatcatccgtgaaagagtccgcttcagagacagctgtggtgaag
ctcactcaggaccagtcctcagaggcagccataggaggagccacactggaccagaccacc
tcggaagaggcaacagggggagctgagccgatccagaaccctccagcctcatgccctgtc
aaccagactcctcccacctcacccgtacaaggagccacaacccaggagcaatcccccagt
aagctgattgggaatctcaggaccttggaactggacagtgagcctcaggaaccccccgaa
gagaaggggctactaggagaggcagctggaggtcagaacacggatgaatcagtgctgacg
caggtctttggagaccatgctgacactgaccaggtcatgttttatgctgtgacgccactc
ccctggtgtccccatttggtggcagtatgccccacacctgaagcaggcctcagtgtgacc
caaccctgtcaggactgtggaacacaccaggagaactgggtgtgtctgtcttgctatcag
gtctactgcggtcgttacgtcaacggtcatatgctccaacaccatgaaggctcgggacac
ccgctggtactcagctatgctgacctgtctgcctggtgctactgctgtcaggcctatgtc
catcacgaggctctcctagccatgaagaacatcgcctaccagaacaagtttggggaggat
ttgccccactcacactaa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (13)   
   RefSeq(nuc) (7)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (39)   

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