KEGG T00998: CDR20291

Clostridium difficile R20291: CDR20291_2898

Entry

CDR20291_2898 CDS T00998

Gene name

xylA

Definition

xylose isomerase

Orthology

K01805

xylose isomerase [EC:5.3.1.5]

Organism

cdl Clostridium difficile R20291

Pathway

cdl00040	Pentose and glucuronate interconversions
cdl00051	Fructose and mannose metabolism
cdl01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Pentose and glucuronate interconversions [PATH:cdl00040]
Metabolism; Carbohydrate metabolism; Fructose and mannose metabolism [PATH:cdl00051]

SSDB

Motif

Pfam:

AP_endonuc_2

Other DBs

NCBI-GI:

260688240

NCBI-GeneID:

8468972

UniProt:

C9YQN1

Position

complement(3430574..3431938)

AA seq 454 aa
MCKILGGHEMSEIFKGIGQIKFEGVKSDNELAFRYYNPEQVVGNKTMKEHLRFAMSYWHT
LCGEGNDPFGVGTVERPWNNVTDPIEIAKIKVDAGFEFMSKMGIEYFCFHDRDIAPEGRD
LEETNKILDEIVEYIKVNMEKTGIKLLWGTANMFGNPRFVHGASTTCNADVYAYAAAQVK
KAMEITKYLGGENFVFWGGREGYETLLNTNTELEMDNFARFLQMAVDYAKEIGFTGQFLI
EPKPKEPTKHQYDFDTATVLGFLRKYNLDKYFKMNIEANHATLAGHTFQHELNIARINNV
LGSIDANQGDLLLGWDTDQFPTNIYDATLAMYEVLKQGGIAPGGFNFDSKVRRASFEVED
LFLAYIAGMDTFAKGLLIAHKLLEDEVFENFTKERYASFSEGIGKDIVEGKVGFKELESY
ALQMPVIKNKSGRQEMLEAILNRYIYEVDTISNK

NT seq 1365 nt +upstreamnt +downstreamnt
atgtgtaaaatattaggaggacatgaaatgagtgaaatatttaaaggaataggacagata
aaatttgaaggagtaaaatctgacaatgaattagcatttagatactacaatcctgaacaa
gtggtaggtaataagactatgaaagaacacttaagatttgcaatgagctattggcatact
ttatgtggagagggtaatgacccatttggagtaggcacagtagagagaccttggaataat
gtaacagacccaattgagatagcaaagattaaagttgatgcaggatttgaatttatgtct
aagatgggaattgagtatttctgttttcatgacagagatatagctccagaaggaagagat
ttagaagagacaaataagatattagatgaaatagttgagtatataaaagttaatatggaa
aagacaggtataaagttattatggggaactgccaatatgtttggaaatccaagatttgtt
catggtgcatctacaacatgtaatgcagatgtatatgcatatgcagcagctcaggttaaa
aaagctatggaaataactaagtacttaggaggagaaaattttgtattctggggtggaaga
gaaggttatgaaactttacttaacactaatacagaacttgaaatggataactttgcaaga
ttcttacaaatggctgtagattatgctaaggaaataggattcactggccaattcttaata
gagcctaagccaaaagagcctactaaacatcaatacgattttgatactgctactgtttta
ggatttttaagaaagtataatctggataaatacttcaaaatgaatatagaagcaaaccat
gcaacacttgcaggacatactttccaacatgaattaaatatagcaagaataaacaatgtt
ttaggtagtatagatgcaaatcaaggagacctattattaggttgggatacagaccaattt
ccaacaaatatatatgatgcaacacttgctatgtatgaagtgttaaagcaaggtggaata
gcaccaggaggatttaactttgactctaaagtaagaagagcatcttttgaggtagaagac
ttattcctagcttatattgcaggaatggatacatttgcaaagggattattaatagctcat
aaattattagaagatgaggtatttgaaaactttactaaagaaagatatgcaagttttagt
gaaggtataggtaaggatatagtagaaggtaaggttggatttaaagagttagaatcttat
gcactgcaaatgccagttataaagaataagtctggaagacaagaaatgctagaagctata
cttaacagatatatatatgaagtagatacaatttctaataagtaa

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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