KEGG   Castellaniella defragrans: BN940_17616
Entry
BN940_17616       CDS       T03058                                 
Name
(GenBank) Serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
cdn  Castellaniella defragrans
Pathway
cdn00260  Glycine, serine and threonine metabolism
cdn00460  Cyanoamino acid metabolism
cdn00630  Glyoxylate and dicarboxylate metabolism
cdn00670  One carbon pool by folate
cdn00680  Methane metabolism
cdn01100  Metabolic pathways
cdn01110  Biosynthesis of secondary metabolites
cdn01120  Microbial metabolism in diverse environments
cdn01200  Carbon metabolism
cdn01230  Biosynthesis of amino acids
cdn01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:cdn00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    BN940_17616
  09102 Energy metabolism
   00680 Methane metabolism
    BN940_17616
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    BN940_17616
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    BN940_17616
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    BN940_17616
Enzymes [BR:cdn01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     BN940_17616
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase Aminotran_5 Cys_Met_Meta_PP
Other DBs
NCBI-ProteinID: CDM25954
UniProt: W8X1Y0
Position
complement(3799598..3800842)
AA seq 414 aa
MFDRSRTLDQADPDIWAAIQQENVRQEQHIELIASENYASPAVMQAQGTQLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRLKAIFGAEAANVQPNSGSQANQGVYMAVLKPGDTVLGMS
LAEGGHLTHGSPVNASGKLYDFHSYGLDANEVLDYDQLEELARTLKPKLIVGGASAYSLR
IDFERMARIAHDNGALFMVDIAHYAGLVAGGVYPNPVPHADFVTSTTHKSLRGPRGGVIM
MKAEFEKIVNSAIFPGIQGGPLMHVIAAKAVAFGEALRPEFKAYAAQVAANARVLADTLV
KRGLRIVSGRTESHVMLVDLRAKGITGKAAEAVLGEAHITVNKNAIPNDPEKPFVTSGIR
LGTPAMTTRGFKEAEAELTGNLIADVLDNPNDADNVARVRAQVNELTARLPVYR
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgtttgaccgttcccgcaccctcgatcaggccgacccggacatctgggccgccatccag
caggaaaacgtccgccaggaacagcacatcgagctgatcgcctcggaaaactacgccagc
cccgccgtcatgcaggcccagggcacgcagctgaccaacaagtacgccgaaggctatccc
ggcaagcgctattacggcggctgcgagtacgtggacgtggtcgagcagctggcgatcgac
cgcctgaaggcgatcttcggcgcggaagccgccaacgtgcagccgaactccggctcccag
gccaaccagggcgtgtacatggccgtgctcaagccgggcgacaccgtgctgggcatgagc
ctggccgaaggcggccacctgacgcacggctcgccggtcaacgcttccggcaagctgtac
gacttccattcctacggcctggacgccaacgaggtcctggactacgaccagctggaagaa
ctcgcgcgcaccctcaagcccaagctgatcgtcggcggcgcctcggcctattcgctgcgc
atcgacttcgagcgcatggcgcgcatcgcccacgacaacggcgccctgttcatggtggac
atcgcccactacgcgggcctggtggccggcggcgtctaccccaacccggtgccgcacgcc
gacttcgtcacctcgaccacgcacaagtccctgcgcggcccgcgcggcggcgtgatcatg
atgaaggccgaattcgagaagatcgtcaattccgccatcttccccggcatccagggcggt
ccgctgatgcacgtcatcgccgccaaggcggtggccttcggcgaggccctgcggcccgaa
ttcaaggcctatgccgcccaggtggccgccaatgcccgcgtgctggccgacaccctggtc
aagcgcggcctgcgcatcgtgtccggccgcaccgaaagccacgtgatgctggtggacctg
cgcgccaagggcatcaccggcaaggccgccgaggccgtcctgggcgaggcccacatcacg
gtcaacaagaacgccatcccgaacgacccggaaaagcccttcgtcaccagcggcatccgc
ctgggcacgccggccatgaccacgcgcggcttcaaggaagccgaggccgagctcaccggc
aacctgatcgccgacgtgctcgacaatccgaacgatgccgacaacgtcgcccgggtgcgc
gcgcaggtcaacgagctgaccgcgcgcctgccggtctatcgctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (15)   
   KEGG PATHWAY (11)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (37)   

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