KEGG   Corynebacterium deserti: CDES_04105
Entry
CDES_04105        CDS       T04068                                 
Name
(GenBank) helicase
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
cdx  Corynebacterium deserti
Pathway
cdx03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cdx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CDES_04105
  09124 Replication and repair
   03420 Nucleotide excision repair
    CDES_04105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cdx03021]
    CDES_04105
   03400 DNA repair and recombination proteins [BR:cdx03400]
    CDES_04105
Enzymes [BR:cdx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CDES_04105
Transcription machinery [BR:cdx03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     CDES_04105
DNA repair and recombination proteins [BR:cdx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     CDES_04105
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C SNF2-rel_dom DEAD AAA_22
Other DBs
NCBI-ProteinID: ALC05267
UniProt: A0A0M4CNV0
Position
complement(838482..840179)
AA seq 565 aa
MAFGDGPLIVQSDKTVLLEVDHPLAGEARIALAPFAELERAPEHIHTYRITPLALWNARA
AGHDAEQVVDMLERYSRFPVPQPLLIDVAETMSRYGRVRLHRHPAHGLVLESAEPAILVE
ISRHKKIKPMLGAQIDPETIVVHPSERGRLKQELLKVGWPAEDLAGYVDGESHPIALSTD
VEDWSLRDYQQMAADSFWEGGSGVVVLPCGAGKTMVGAASMAKAQSTTLILVTNTVAGRQ
WKDELLRRTTLTEDEIGEYSGERKEIRPVTIATYQVVTRRTKGEYKALELFDSRDWGLII
YDEVHLLPAPVFRMTSDLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDLESQG
FIATADCVEIRSTMTDSERMVYATAEASDRYRLAATAHTKVAVVRKVVERHHGQPTLIIG
AYLDQLEELGKEFDAPIIDGKTSNKKREALFDQFRSGELSILVVSKVANFSIDLPEASVA
IQVSGTFGSRQEEAQRLGRLLRPKHDGGEAHFYSIVSRDTLDTEYAAHRQRFLAEQGYAY
RIMDADDLLFPMPGTITETITKKDQ
NT seq 1698 nt   +upstreamnt  +downstreamnt
gtggcatttggagatggacctctaatcgtccaatccgacaaaactgtcctgctggaagtt
gatcacccgttggcaggtgaagcacgcatcgctttggcaccgttcgccgagctcgagcgt
gcacctgagcacatccacacctaccgcatcaccccgcttgcgctgtggaatgctcgggca
gctggacacgacgccgagcaggtagtagacatgctggaacgctactcgcgtttccccgta
ccgcaacccctgcttatcgacgtcgccgaaacaatgtccaggtatggacgtgttcgcctc
caccgccaccccgcccacggcctcgtcctggaatcagcagaacctgccatcctcgtggag
atctcccgtcacaagaagatcaagccgatgctgggcgctcagatcgatcccgagaccatc
gttgtccatccttctgagcgcgggcgcctcaagcaggagcttctcaaagtgggttggcct
gcagaagacctcgcaggatacgtagacggtgaatcacaccccattgctttgtccaccgac
gttgaagactggtcactgcgcgattaccaacaaatggccgctgattccttctgggaaggc
ggatccggcgtcgtggtacttccctgcggagcaggtaaaaccatggttggtgctgcatcg
atggccaaagctcaatccacaaccctgatcctggtcaccaacactgtggctggccgccaa
tggaaagacgaacttcttcgtcgcaccacacttaccgaagacgaaatcggcgagtactcc
ggcgaacgcaaagaaatccgccccgtcaccatcgccacctaccaagtagtcaccaggcgg
accaaaggcgaatacaaagcccttgagcttttcgattcccgcgactggggccttatcatc
tacgacgaagtacatcttctccccgcccctgttttccgcatgacctcagatctgcaatcc
aggcgccgacttggccttaccgcaaccctcgtacgcgaagatggccgagaaggcgacgtt
tttagcctcattggcccaaagcgttacgacgctccctggaaagacctcgaatctcagggc
tttatcgccaccgctgattgcgtagagatccgctccaccatgacagactccgaacgcatg
gtgtacgccaccgctgaggcctcagatcgctaccgccttgccgccaccgctcacacaaaa
gtggccgttgtacgcaaggtggtggaacgccaccacggccaaccaacgctgattatcggc
gcatatctcgaccaattggaagagctcggcaaagaattcgacgccccaattatcgacgga
aaaacctccaacaagaaacgcgaggcacttttcgatcaattccgttccggcgagctctcc
atcctagtggtctcaaaggtggcgaacttctccatcgacttgcccgaagcctcagtagca
atccaagtctctggcacctttggcagccggcaggaagaagcccagcgattgggtcgtctc
ctgcgccccaagcacgacggtggagaagcacacttttactccatcgtcagccgagacacc
ctcgacacggagtacgcagcccaccgccaacgattccttgcagaacagggctacgcttac
cgcatcatggacgctgacgatctgctcttccccatgccgggaactattactgaaactatt
actaagaaagaccaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system