KEGG   Corynebacterium deserti: CDES_08295
Entry
CDES_08295        CDS       T04068                                 
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
cdx  Corynebacterium deserti
Pathway
cdx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cdx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CDES_08295 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cdx03400]
    CDES_08295 (ruvB)
Enzymes [BR:cdx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CDES_08295 (ruvB)
DNA repair and recombination proteins [BR:cdx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CDES_08295 (ruvB)
    RecFOR pathway proteins
     CDES_08295 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 AAA_16 Mg_chelatase AAA_14 RNA_helicase AAA_3 nSTAND3 IstB_IS21 Sigma54_activ_2 Rad17 NTPase_1 AAA_25 Zeta_toxin AAA_18 TsaE AAA_19 AAA_17 Resolvase AAA_33 NACHT bpMoxR
Other DBs
NCBI-ProteinID: ALC06064
UniProt: A0A0M4CJR2
Position
complement(1701339..1702430)
AA seq 363 aa
MSDVERTEFEIPGGIPPRRTGGAGRAPDASVDANVQAEDVDAEVTLRPKSLTEFIGQPKV
RDQLSLVLTGARKRGVVPDHVLLAGPPGLGKTTMAMIIAQELGTSLRMTSGPALERAGDL
AAMLSNLMEGDVLFIDEIHRIARPAEEMLYMAMEDFRIDVIVGKGPGATSIPLEIPPFTL
VGATTRSGMLTGPLRDRFGFTAQMEFYDVPDLTKVVKRTAKILNVGIDHDAAVEIASRSR
GTPRIANRLLRRVRDFAEVHADGHISMGAANAALIVFDVDELGLDRLDRAVLDALIRGHG
GGPVGVNTLAVAVGEEPATVEEVCEPYLVRAGMIARTGRGRVATAAAWRHLGLEPPEGTI
GDY
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgtctgacgtggagagaactgagtttgaaattcctggcggaattccgcctcgccgcacg
ggaggggcaggacgtgcacccgatgccagtgtggatgccaacgttcaagcagaagacgtc
gatgcagaagtaacccttcgcccgaaatcactcaccgagtttattggccagccaaaggtg
cgagaccagctgagcttggtgctcactggtgcgagaaagcgtggagtcgtcccagaccac
gtgctcttggcaggtcctcctggtctgggtaagaccacgatggcgatgattatcgcgcag
gaactgggtacgagcctgaggatgacgtctggaccagcactggagcgagccggcgatttg
gcagcaatgctttccaatttgatggaaggcgacgtgctctttattgatgaaatccatcgc
atcgctcgacctgcagaagaaatgctgtatatggcgatggaagatttccgcatcgacgtc
atcgtcggtaaaggtccaggtgcaacttctattccgctggagatcccgccttttaccctg
gtgggagcaacaactcgctccggtatgctcaccggaccgttgcgcgatcgattcggattc
acagcgcagatggaattctacgatgtgccggatctgaccaaagtggttaagcgaacggca
aagattcttaacgttggtattgatcatgatgcggcagtggaaatcgcgtcacgctcgcga
ggcactccccgtattgctaaccgcctgttgcgtcgcgttcgagattttgcagaagtccac
gccgacggacacatctccatgggggctgccaacgctgcgctcatcgtgtttgatgttgat
gagctcggattggaccgcctggacagggctgtcctcgatgccctgatcagaggacatggc
ggcggacccgttggtgtcaacacgttggctgttgcagtcggtgaagaacccgccaccgtc
gaggaagtctgcgagccgtacttggtgcgtgctggaatgattgcccgaaccggtcgaggc
cgtgtggcaaccgctgcggcatggcgccaccttggattggaaccgccagagggaacgatc
ggcgactactag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (26)   
   Pfam (26)   
All databases (36)   

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