KEGG   Corynebacterium deserti: CDES_10765
Entry
CDES_10765        CDS       T04068                                 
Name
(GenBank) hypothetical protein
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
cdx  Corynebacterium deserti
Pathway
cdx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cdx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CDES_10765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cdx03019]
    CDES_10765
   03009 Ribosome biogenesis [BR:cdx03009]
    CDES_10765
Enzymes [BR:cdx01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     CDES_10765
Messenger RNA biogenesis [BR:cdx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CDES_10765
Ribosome biogenesis [BR:cdx03009]
 Prokaryotic type
  rRNA processing factors
   CDES_10765
SSDB
Motif
Pfam: RNase_E_G IF2_N S1 PCB_OB DnaJ_CXXCXGXG
Other DBs
NCBI-ProteinID: ALC06528
UniProt: A0A0M4CEX4
Position
complement(2224477..2227665)
AA seq 1062 aa
MSEISPSAVLAAEFDRESLGEKTRVHQLAKKLGLASKDLVVALDGLGLVKVAQSNLSKAE
VEKLLDVLAQPVRDAQPSAVPDLEPVERIRRRVEKNVANEIHQIEEKVERELASAQPNDF
EAAVKEEAEAELLEDVVPEITPAPAEAPVYTPIFVAPAVVSAEETTENVEDTDDEQARER
STRKRRGRRGTGRGRGVEVAKEPETPEVEEVTEPVGIKGSTRLEAKRRRQSEMREENKKR
RHVVSTQEFLERRESMERRMIVRERQRHDHPGLVTQVGVLEDDQLVEQFVTSDAQTSMVG
NIYLGRVQNVLPSMEAAFIDIGKGRNGVLYAGEVDWKAAGLGGRGRRIEQALKAGDQVLV
QVSKDPLGHKGARLTTQISLAGRYLVYVPGGRSAGISRKLPGPERKRLKEILGRVVPAQG
GTIIRTAAEGVSEKNIAADVNRLHTLWEQIKERTDKEKKSRGSKPVTMYEEPDMLVKVIR
DLFNEDFTSLIVDGDRAWNTVRAYIQSVAPDLVSRVEHFDRADYDGKDAFEAFDLNSQLE
EALSRKVNLPSGGSLIIDRTEAMTVIDVNTGRYTGKGGGNLEETVTLNNIEAAEEIVRQM
RLRDLGGMIVVDFIDMVLPENQELVLRRLKEALENDRTRHQVSEVTSLGLVQMTRKRIGP
GLLETFSTPCEHCEGRGIIVHEDPVDNVDQRVEAKAEERSRRHQKSQETTHDGSRDDSAN
SKKAAEHPMVVAMRDLVESDEHDLDQEFEELAASVIVLDDTDVDELVDGIVNDDLDSPER
ILAESTVEPEEGPRRRARRRKQNESSASSASDISAIAAAAVDIANDEDPDEPSGSSYVSD
LDNDSVADSLVDSSAEYDAEYDKAVAEFEASPRRRRKTRGNSRSDFAPKPQDFKPAQEEG
PRRRRGRKADAQQVVAAKVGAEVGAEVVADVASEEPKQSTPRRNRPSEVSSGAPSRSRRR
AVRRRFADPEVEQQIIEESAPAEVSAHEAVNAPSVESADGRRRRRRAVRVLSSGAENPQK
ASGATAPKAESAVSSNAGGKKETNPGRRRRATRRSPRSSTRG
NT seq 3189 nt   +upstreamnt  +downstreamnt
gtgtcggaaatttctccctcggcagtattggctgcagaatttgatagagaatccctcggg
gaaaaaactcgcgtccaccagctcgcaaaaaagctggggttggcatcaaaagacctggtt
gttgccctcgacggcctgggattggtcaaggtagcgcagtccaacctgagcaaggctgag
gtagaaaagcttctcgacgtcctcgcgcagccagtgcgcgatgcccagccatctgccgtg
cccgacctggaaccagtggagcgaatccgccgccgggttgagaaaaacgtggccaatgaa
atccaccagatcgaggaaaaagtcgagcgtgagctcgcctctgcgcagccaaacgatttt
gaggccgcagtaaaggaagaagctgaggcagagctgctggaagatgtggttccagaaatc
accccagcgcccgctgaagcaccggtgtacacgccgatctttgtcgcgcctgcagtggtg
tcggctgaagaaaccaccgaaaatgtcgaggacaccgatgatgagcaggctcgcgagcgc
tcaacacgcaagcgccgtggacgtcgcggcaccggtcgtggccgtggggtggaagtagcc
aaagagcccgaaacccctgaggtggaagaggtcaccgagcccgtcggaattaagggttcc
acccgtttggaagccaagcgtcgccgtcaatcagagatgcgagaagaaaataaaaagcgt
cgccatgtggtgagcacccaagaatttttggagcgccgcgaatccatggaacgccgcatg
atcgtgcgcgaacgccagcgccatgatcacccaggcctggtcacccaggttggtgtcctg
gaagatgatcagctggtggaacaatttgttacctctgatgcacagacctccatggtgggc
aatatctaccttggtcgtgtgcaaaatgtgctgcccagcatggaagcagccttcattgac
atcggaaaaggccgcaatggtgtcctctacgctggcgaagtggattggaaagccgctggt
cttggtggccgtggccgccgcatcgaacaggccctcaaagctggtgaccaggtgctcgtg
caggtatccaaggatccccttggacacaagggtgcacgcctgaccacccaaatttccctg
gctggacgctaccttgtctacgttccaggtggccgaagcgcgggcatttcccgcaagctt
cctggaccagagcgcaagcgcctcaaggaaatccttggacgtgttgtccctgcacagggt
ggcactatcatccgcaccgcagcggaaggtgtgtctgaaaagaacatcgcagccgatgtt
aaccgcctgcacaccctgtgggagcagattaaagaacgtaccgacaaggaaaagaaatcc
cgcggctccaagcccgtgaccatgtatgaagaaccagacatgctggtcaaggtgattcgc
gacctcttcaacgaagatttcacctccctcatcgtcgacggcgaccgcgcctggaacacc
gtgcgtgcctacattcaatccgttgcacctgacctggtgtcccgcgttgagcattttgat
cgcgcagattacgacggcaaggatgccttcgaagcattcgacctcaacagccagctagaa
gaagcactgtcccgcaaggtgaacctgccttccggtggttcgttgatcatcgaccgcacc
gaagccatgaccgtcatcgacgtcaacaccggacgctacaccggtaagggtggcggcaac
ctggaggaaaccgtcaccctcaacaacattgaggctgccgaagaaatcgtccgccaaatg
cgtctacgtgacctcggtgggatgatcgttgtcgacttcatcgacatggttctacccgaa
aaccaagagctcgtcctgcgccgcctcaaggaagccctggaaaacgaccgcacccgccac
caggtctccgaagtgacctcacttggtctcgttcagatgacccgcaaacgtatcggtccc
ggcctgctggaaacattctccaccccatgtgagcactgtgaaggccgaggcatcattgtt
cacgaagacccagtggacaatgtcgaccagcgggtagaagccaaggccgaggaacgttcc
cgtcgccatcagaagagccaggaaactactcatgatggttctcgtgatgattctgcgaac
tccaaaaaagccgccgaacaccccatggttgttgccatgcgtgaccttgtggaaagcgac
gagcacgacctcgaccaggaatttgaagagctcgctgcctcagtcattgtcctagatgac
accgacgttgatgaacttgttgacggcatcgtcaacgacgatctcgattctccagagcgt
atcctcgccgaatccaccgttgagccagaagaaggacctcgtaggcgtgcacgtcgacgc
aagcaaaatgagagctcggcttcgtctgcttctgacatttccgccatcgccgctgctgca
gttgatattgccaacgacgaagacccagatgaaccatccggatcatcctatgtgtctgac
ctggataacgattctgtcgctgattctttggttgattcttccgcagaatatgacgcggaa
tatgacaaagccgttgcagagtttgaggcaagccctcgccgccgacgcaagacccgtggc
aactcacgatctgattttgcgccaaagccacaagatttcaagcctgcacaggaagaaggg
cctcgtcgacgtcgtggacgtaaagcggatgctcagcaggtcgtcgctgcaaaggtcggc
gcagaggtcggcgcagaggtcgttgctgacgtagcttcagaggagccgaagcagtctacg
cctcgtcgcaaccgtccaagcgaagtgagctctggtgcgccatcgcgttcacgtcgccgt
gcagttcgtcgtcgctttgcggacccagaagtagagcagcagatcattgaagaatctgca
cctgcggaggtttctgctcacgaagccgtgaacgcgccttccgtcgagagtgctgatggt
cgtcgcaggcgtcgtcgtgcagttcgcgtcttgtcatcaggggcagagaatcctcagaag
gcaagcggtgcgacagcaccgaaagctgaatctgccgtgtcctccaacgctggaggtaag
aaggaaaccaaccctggacgtcgccgacgcgccactcgacgctctccacgatcttccaca
cgagggtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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