KEGG   Dickeya fangzhongdai ND14b: LH89_14430
Entry
LH89_14430        CDS       T03347                                 
Name
(GenBank) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
ced  Dickeya fangzhongdai ND14b
Pathway
ced00040  Pentose and glucuronate interconversions
ced01100  Metabolic pathways
ced02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ced00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    LH89_14430
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LH89_14430
Enzymes [BR:ced01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     LH89_14430
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix
Other DBs
NCBI-ProteinID: AIR70341
Position
complement(3270497..3271624)
AA seq 375 aa
MKSLITPITAGLLLVLSQPLLAATDTGGYAVTAGGNTTGAVSKTAASMQDIVDIIAAARL
DANGKKVKGGAYPLVITYTGNEDSLINAAAANICGQWSKDARGVEIKEFTKGITIIGANG
SSANFGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWIDHNELFAANHECDGT
PDGDTTFEAAVDIKGASDYVTVSYNYIHGVKKVGLDGSSSSDTGRNITYHHNRYNDVNAR
LPLQRGGLVHAYNNLYSNVTSSGLNVRQNGQALIESNWFENAVNPVTSRYDGKNFGTWVL
KNNNITKPADFSTYSITWTADTKAYVNADSWTSTGTFPTVAYSYSPVSAQCVKDKLANYA
GVSKGLATLTSAACK
NT seq 1128 nt   +upstreamnt  +downstreamnt
atgaaatcactcattaccccgattaccgctggactgctgctggtactcagtcaaccgttg
ctggccgccaccgacaccggcggctacgccgttacagcaggcggcaacacgacaggcgcc
gtcagcaaaacggcggcgtcgatgcaggatatcgtcgatatcatcgccgcggcccgtctg
gatgctaacggcaaaaaggtgaaaggcggcgcgtacccgctggtcatcacctataccggt
aacgaagattcgctgatcaacgccgctgccgccaatatctgcggccagtggagcaaagac
gcccgcggtgtggaaatcaaggagttcaccaaaggcatcaccatcatcggcgccaacggc
tcttccgccaacttcggtatctggattaagaaatcctccgacgtggtggtgcaaaacatg
cgtatcggctacctgccgggcggggccaaagatggcgacatgatccgcgtcgacgattcg
ccgaacgtctggatcgaccacaacgaactgttcgccgccaaccacgaatgcgacggcacg
ccggacggcgacaccacctttgaggccgcggtagatatcaagggggcttcggattatgtc
accgtgtcctacaactacatccacggcgtgaagaaagtcggtctggacggttccagcagc
agcgacaccggccgcaacatcacctatcaccataaccgctacaacgacgtcaacgcccgc
ctgccgttgcagcgcggcggtctggtacacgcttacaacaacctgtacagcaacgtaacc
agttccggcctgaacgtgcgccagaacggtcaggcgctgatcgaaagcaactggttcgaa
aacgcggtgaacccggtgacgtcccgttatgacggtaagaacttcggcacctgggtgttg
aaaaacaacaacatcaccaaaccggccgacttctctacctacagcatcacctggacggca
gacaccaaggcttacgtcaacgcggatagctggacttccaccggtactttcccgacggtg
gcctacagctacagcccggtcagcgcacagtgcgtgaaggacaaactggctaactacgcc
ggcgtgagcaaaggcctggcgacgctgaccagcgccgcctgtaaataa

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