KEGG   Caenorhabditis elegans (nematode): CELE_C18E3.8
Entry
CELE_C18E3.8      CDS       T00019                                 
Symbol
hop-1
Name
(RefSeq) Presenilin hop-1
  KO
K04505  presenilin 1 [EC:3.4.23.-]
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel04310  Wnt signaling pathway
cel04330  Notch signaling pathway
cel04361  Axon regeneration
Brite
KEGG Orthology (KO) [BR:cel00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    CELE_C18E3.8 (hop-1)
   04330 Notch signaling pathway
    CELE_C18E3.8 (hop-1)
 09150 Organismal Systems
  09158 Development and regeneration
   04361 Axon regeneration
    CELE_C18E3.8 (hop-1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cel01002]
    CELE_C18E3.8 (hop-1)
Peptidases and inhibitors [BR:cel01002]
 Aspartic peptidases
  Family A22: presenilin family
   CELE_C18E3.8 (hop-1)
SSDB
Motif
Pfam: Presenilin DUF6128 GAPT
Other DBs
NCBI-GeneID: 172017
NCBI-ProteinID: NP_491328
WormBase: WBGene00001985
Ensembl: WBGene00001985
UniProt: O02100
Position
I:complement(4208515..4210341)
AA seq 358 aa
MPRTKRVYSGKTITGVLYPVAICMLFVAINVKLSQPEQQEQSKVVYGLFHSYDTADSGTI
TLYLIGFLILTTSLGVFCYQMKFYKAIKVYVLANSIGILLVYSVFHFQRIAEAQSIPVSV
PTFFFLILQFGGLGITCLHWKSHRRLHQFYLIMLAGLTAIFILNILPDWTVWMALTAISF
WDIVAVLTPCGPLKMLVETANRRGDDKFPAILYNSSSYVNEVDSPDTTRSNSTPLTEFNN
SSSSRLLESDSLLRPPVIPRQIREVREVEGTIRLGMGDFVFYSLMLGNTVQTCPLPTVVA
CFVSNLVGLTITLPIVTLSQTALPALPFPLAIAAIFYFSSHIALTPFTDLCTSQLILI
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgccaagaacaaaaagagtgtactccgggaaaaccataacaggagttctctatcctgtt
gcaatttgcatgttgttcgtcgcgataaatgtgaaactcagccagccagaacaacaagaa
caatctaaagtagtatacggactgttccattcatacgataccgcggatagcgggacaatc
actttgtatttgattggatttttgattttgacgactagtttgggagttttttgttatcag
atgaagttttataaggccataaaagtatacgtattagccaacagcattggaattctgctg
gtttactcagttttccatttccaaagaatagctgaagcccaatcaattccagtatctgta
ccaacatttttcttccttattctccaattcggtggtcttggaataacatgtctccactgg
aaatcccatcgacgacttcatcaattttatcttattatgctcgcaggtctaactgcaatt
tttattctcaatattcttcccgactggactgtttggatggcattaacagcgatttcattt
tgggatattgttgctgttctgacaccgtgtggaccattaaaaatgctcgtggaaactgcg
aatcgacgcggagacgacaaatttccagctattttatacaattcaagttcatacgtgaat
gaagtggattcccctgacacaacacgatcaaacagtaccccgctaactgaattcaacaat
tcatcgagttcaaggcttttggaatctgattcacttttgaggcctccagtgattcccaga
cagattagagaagtacgagaagttgaaggaacaattcggttaggaatgggagattttgta
ttttattcactgatgttgggaaatactgttcaaacgtgcccacttccaactgtcgtcgcg
tgcttcgtatccaatcttgttggtttgacaattactctgccaattgtcacattatctcaa
actgcacttccagcattgccgttcccgttggcaattgcagcaatattctacttctcctcc
catatcgcattaaccccattcaccgatctgtgcacctcacagctaattttaatttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (30)   

Download RDF
DBGET integrated database retrieval system