KEGG   Caenorhabditis elegans (nematode): CELE_C27B7.4
Entry
CELE_C27B7.4      CDS       T00019                                 
Symbol
rad-54.L2
Name
(RefSeq) Helicase ARIP4
  KO
K10876  RAD54-like protein 2 [EC:5.6.2.-]
Organism
cel  Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:cel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cel03400]
    CELE_C27B7.4 (rad-54.L2)
DNA repair and recombination proteins [BR:cel03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     CELE_C27B7.4 (rad-54.L2)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 177706
NCBI-ProteinID: NP_501545
WormBase: WBGene00007761
Ensembl: WBGene00007761
UniProt: Q18241
Position
IV:8894077..8901389
AA seq 1274 aa
MSEEIDENTMKEEQEEEERDEIEEKEEKPDAQQQELLNIRIPTQTKKSLKRKHIKTDFGA
EDLDENVLEAQRLEKQRLERLEKIKPENDHIQQMESLFLAGASEGQLPQLDLQDDDFEEM
FGFSVENDNKKYRYGDEEKPEPMFHLQEPSTSRGHVDVVDLTLDDSDDDCLITDVKSVMP
QVVPGRRMRWAQAEKDRIDADQMDIQHNIEARRLKKMRSAKDLESTEKKEGRLLVNAGHP
EEDPDIFVISHLTHVLQPHQLGGIRFMYDNTIESLGEYKKSDGFGCILAHSMGLGKTIQV
ITFSEIFLRATKAKKVLVIVPINTIQNWYSEYDKWIPKFSDTGDRIRSFEVFLLGDGVKT
FDQRVNLIEQWDQTGGVMLVGYDMFRLLIKMTLPKKQKKGRPKLNLSGISSGFSKDSSED
QKLRDEELEFETGFTSGGRVRQEAYSLIRSALLEPGPDLVVCDEGHKIKNITAEISMTLG
AINTKRRIVLTGYPLQNNLLEYFCMIDFVRPKYLGTRKSFIDRFEKPIKNGQCVDSSPDD
VKIALQRTHVLVELVKGFVQRRTHHLLKKILPESKEYVLLLRKSQIQRQLYRNFVLWAKN
EIAANNDAVFNPLMAFSACSKIWNHPDILYRLVEQKKRAEEDKKRVEQMKFAQLQQQQQQ
QQQQLQGMMMMGNNGMMPGFGAQFHPQQNGMMMQNGSWHPNNYQMPSPFNSIPSNPSTPT
SSSTSKSAKKTKKPRGSKKAPKSDEEDEEVEKESRMKYDWTFELFEKYQEGVLENGYKIV
ISLEILDESTQIGEKILIFSQNLTALDMLEEILKKRQIRGKDGPGQRWEKNRNYLRLDGT
TSGADREKLINRFNSEPGLSLFLISTRAGSLGINLVSANRCIIIDACWNPCHDAQAVCRV
YRYGQQKKTFVYRLIMDNSMERSIFNRQISKHGLQQRVVDDAQVDANISQKELETLLMYD
EAQDVNHDKWNTDDWDFGDPVLDSITKRMSQMFAGKPFLHETLIMESEQSLSEQEKREAQ
LLFDRERRMENYDPLSGLSSSNFYNNAPGSSMGMMGPPPVPMFNNNMQNSFNNHWQQSPN
QLAPNFGSYPPQQFPQPMPNMSQFPPHGPSPQIPSIRPSPMPHTLRMNVSQFHHQGGGHT
MTSFNNGYPNNNNGGAIGNPQQMLPPRDPSAFPGAVMSKIPSFSPAGAVQQLITDRQLVF
PIVGHRDQLHQVQANTPIQLVVPKNGYYVKLRDGTILDAVGSVFENHARQLRDMYLSKNF
NHDPQQVQEVIDLD
NT seq 3825 nt   +upstreamnt  +downstreamnt
atgagtgaagaaatagacgaaaatacgatgaaagaagagcaagaagaagaagaaagagat
gaaatcgaagaaaaagaagagaaaccagatgcacaacaacaagagctccttaatattcga
attccaacgcaaaccaaaaaatcgcttaagcgcaagcacatcaaaacagacttcggcgca
gaagatctcgatgaaaatgtgttggaagcccagcgactcgagaagcaacgtctagaacgt
ttggagaaaatcaagcctgaaaatgatcatattcaacaaatggaatcattgtttcttgct
ggagccagtgaagggcaacttccacaacttgatctccaagacgatgattttgaagagatg
tttggatttagtgtggaaaatgataataaaaaatatcgttatggagatgaagagaagcct
gagccaatgtttcatctacaggaaccttctacatcgcgtggtcatgttgatgttgtggat
ttgacgttggatgattcagatgatgactgcttgataactgatgttaagtcggttatgcct
caagtcgtacctggtcgaagaatgaggtgggcacaagctgagaaagacaggatagacgcc
gatcaaatggacattcaacataatattgaagcacgacggttgaagaaaatgagaagtgca
aaggatttggagagtactgaaaagaaagaaggtcgattacttgttaatgcaggacatcct
gaagaagatccggacatatttgtgatatctcatctgacacatgtgttacagccacatcaa
cttggaggaatccgttttatgtatgataacacaattgaatctctcggagaatacaaaaaa
tctgatggtttcggatgtatacttgcgcattctatgggtctcggaaaaaccattcaagtc
atcacattttcggaaatatttttgagagcaacaaaagcgaaaaaagtgctcgttattgtt
cccataaacactattcaaaactggtattcggaatacgataagtggattccaaaattctcg
gataccggtgaccgtattcgaagtttcgaagtattcttgctgggtgatggtgtcaagaca
tttgatcaacgggttaatttgattgaacaatgggatcaaacgggcggtgtgatgcttgtt
ggctacgatatgttccgtcttcttatcaaaatgacgcttccaaaaaaacagaaaaaagga
aggccaaagctgaatttatctggaatttcttcaggtttttcaaaagattcttctgaagat
cagaagctgagagatgaagaattagagtttgaaactggatttacaagtggcggaagagtt
agacaagaggcctacagtttgatccgaagtgcacttcttgaaccaggaccagatcttgtt
gtatgtgatgaaggtcataaaatcaagaacatcactgctgaaatctcaatgacacttgga
gcaattaatacaaaacggcgcattgtgttgactggatatcctcttcaaaacaatttgctc
gaatatttctgcatgattgattttgttcggccgaaatatcttggaacgcggaaatcattc
attgatcgattcgagaaacctatcaaaaacggacaatgtgttgattcttcgccggatgat
gtgaaaatagcactacaacgaactcacgtgcttgtggaattagtgaagggatttgttcaa
cgaagaacacatcatttactgaaaaagattctacctgaaagcaaagaatatgtgttattg
ctcaggaaaagtcaaattcaacgccaactttatcgaaactttgtattatgggcgaaaaat
gaaatagctgcaaataatgatgcagtgttcaacccgctaatggcattctccgcatgctca
aaaatttggaatcatccagacattctgtacaggcttgtagaacagaaaaagagagctgaa
gaggataaaaagagagtggagcaaatgaaatttgcacaacttcagcagcaacaacaacag
caacaacaacagcttcagggaatgatgatgatgggaaataacggtatgatgccgggattt
ggagcacaatttcatccacaacaaaatggaatgatgatgcagaatggttcatggcatccg
aataactaccaaatgccatctccattcaattcaatcccctcgaatccttcaacaccgact
tcatcttccacttctaaatctgccaagaaaaccaaaaaaccaagaggatcgaaaaaagca
ccgaaaagtgatgaagaggacgaggaagttgaaaaggaatctagaatgaaatatgactgg
acatttgaacttttcgaaaaatatcaggaaggagttctagagaacggatataagatcgtc
atttcgcttgaaattctggatgaatccactcaaattggagaaaaaattctgattttcagc
cagaacttgactgctttagatatgctagaggagatactcaaaaaacgacaaatccgtgga
aaagatggtcctggtcaacgatgggagaagaatagaaattatttacgattggatggaacg
actagtggtgctgatcgagaaaagcttatcaatcgctttaactcagaaccagggctttcg
ttgtttttgatttccactagagctggatcgttgggtattaatttggtttcagccaacaga
tgcattatcattgacgcttgttggaatccttgtcacgatgctcaagctgtatgtcgtgtc
tatcgatatggtcaacagaagaaaacatttgtttatcgtcttattatggataactcaatg
gagcgatcgattttcaatcgacaaatttcaaaacatggactacaacaaagagtagttgac
gatgcacaagttgatgcaaatatttcgcaaaaagaattggagactcttctaatgtatgat
gaggcacaagatgttaatcatgacaaatggaatacagatgattgggatttcggagatccg
gttctagactcaatcactaagagaatgagtcaaatgtttgccgggaaaccgttccttcat
gaaaccttgataatggagtcagagcaatcactcagcgagcaggaaaaacgagaagctcaa
ttactttttgatagagaacgacgtatggagaactatgatccattgagtggcctgagcagt
tctaacttttataacaatgctcctggaagctcaatgggaatgatgggtccaccaccagtt
ccgatgttcaataataacatgcaaaatagtttcaataatcattggcaacaatctcctaat
cagcttgcacccaattttggatcttatccaccacagcaatttccacaaccgatgccaaac
atgtcacaatttccacctcatggaccatcacctcaaattccatcaattcgtccatcacca
atgcctcacacgcttcgaatgaatgtcagtcaattccatcaccaaggaggtggtcatacg
atgacgtcattcaacaatggctatccgaataataacaatggaggagctataggaaaccct
caacaaatgcttcctccaagagatccatcagcttttccgggagctgttatgagcaaaata
ccatcattttccccggctggagcagttcaacaattgattactgatagacaactcgttttt
cccattgtcggacatagagatcagcttcatcaggttcaggcaaatacaccaatacagtta
gttgttccgaaaaatggatattatgtgaaactacgtgatggaacaattcttgacgctgtc
ggaagtgtttttgagaatcatgcccgtcagcttcgtgatatgtatctaagcaaaaatttc
aaccatgatccgcagcaggttcaagaagtcatcgatcttgattaa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (54)   

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