KEGG   Caenorhabditis elegans (nematode): CELE_C42D4.6
Entry
CELE_C42D4.6      CDS       T00019                                 
Symbol
skr-16
Name
(RefSeq) Skp1-related protein
  KO
K03094  S-phase kinase-associated protein 1
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel03083  Polycomb repressive complex
cel04120  Ubiquitin mediated proteolysis
cel04141  Protein processing in endoplasmic reticulum
cel04310  Wnt signaling pathway
cel04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:cel00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    CELE_C42D4.6 (skr-16)
   04120 Ubiquitin mediated proteolysis
    CELE_C42D4.6 (skr-16)
  09126 Chromosome
   03083 Polycomb repressive complex
    CELE_C42D4.6 (skr-16)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    CELE_C42D4.6 (skr-16)
   04350 TGF-beta signaling pathway
    CELE_C42D4.6 (skr-16)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cel04131]
    CELE_C42D4.6 (skr-16)
   04121 Ubiquitin system [BR:cel04121]
    CELE_C42D4.6 (skr-16)
   03036 Chromosome and associated proteins [BR:cel03036]
    CELE_C42D4.6 (skr-16)
Membrane trafficking [BR:cel04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    CELE_C42D4.6 (skr-16)
Ubiquitin system [BR:cel04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Adaptor protein
     CELE_C42D4.6 (skr-16)
   Cul7 complex
     CELE_C42D4.6 (skr-16)
Chromosome and associated proteins [BR:cel03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     CELE_C42D4.6 (skr-16)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     CELE_C42D4.6 (skr-16)
SSDB
Motif
Pfam: Skp1 Skp1_POZ PCNA_C Cys_box DUF615
Other DBs
NCBI-GeneID: 191765
NCBI-ProteinID: NP_501128
WormBase: WBGene00004822
Ensembl: WBGene00004822
UniProt: Q18567
Position
IV:<7168710..>7169255
AA seq 181 aa
MVKSPKSSKKAAARAAKARETAETNAFLDSIFILISSDGEKFQTDGHCIRHSKVLMQASK
SLETPDTPIQVEKVQGDTLNRVLEWCNNHRDDGKYVSQCGPSLRLPQWDFRWLKDLDNQE
LVDLINASNDLQMQQLMDYACKTVANMAKGKNPAQLRELFGILTDEEEAELALNEPGPST
A
NT seq 546 nt   +upstreamnt  +downstreamnt
atggtaaagtctccaaaatccagtaaaaaggctgcagcgagagcggcaaaagcccgtgaa
actgctgaaaccaatgcattcctggatagtatattcattttaatatcgtcagatggtgaa
aaatttcaaacggatggtcattgcataaggcattcaaaagttctcatgcaagcgtcaaaa
tcattagaaacaccggatacaccaattcaagttgaaaaagtgcaaggagacacactgaat
cgagttctggaatggtgtaataatcatcgagacgatggaaaatatgtgtcacaatgtgga
cctagtctacgtcttccacaatgggattttcgatggcttaaagatttggataatcaggag
ctagttgatttaatcaatgcgtcgaatgatctacaaatgcaacaattgatggattatgca
tgcaagacagtggcaaatatggcaaaaggaaagaatcccgcacaattgagagaacttttt
ggtattctaacagacgaagaggaagctgaacttgcacttaatgaacctggaccctcaacc
gcataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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