KEGG   Caenorhabditis elegans (nematode): CELE_F14B4.3
Entry
CELE_F14B4.3      CDS       T00019                                 
Symbol
rpoa-2
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 homolog
  KO
K03002  DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cel00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CELE_F14B4.3 (rpoa-2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cel03021]
    CELE_F14B4.3 (rpoa-2)
Enzymes [BR:cel01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CELE_F14B4.3 (rpoa-2)
Transcription machinery [BR:cel03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     CELE_F14B4.3 (rpoa-2)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpa2_4 RNA_pol_Rpb2_2 RNA_pol_Rpb2_4
Other DBs
NCBI-GeneID: 172752
NCBI-ProteinID: NP_492476
WormBase: WBGene00008781
Ensembl: WBGene00008781
UniProt: Q27493
Position
I:complement(9280923..9286576)
AA seq 1127 aa
MDCDIASYHVDSFDFLVSKGCQFAAQAVPAEKFRLKNGDAVTMKFTSAQLHKPTLDTGAK
LTSDTLPLLPAECRQRGLTYAGNLKVGIDVHVNGSRLDIIEIILGKVPIMLRSEGCHLRG
MSRKELVVAGEEPIEKGGYFIVNGSEKVIRLLIANRRNFPIAIIRKTFKEKGKLFSEFGV
MMRSVKENHTAVMMTLHYLDTGTMQLALQFRREIFYVPLMYIVKALTDKNDAVISAGFKR
GRNQDQFYSSCILNMLAQCQEEEILNQEAAIRAIGSRFRVAVSDRVAPWEDDLEAGRFII
RECVLIHLDSDEEKFHTLAYMTQKLIALVKGECAPETPDNPQFQEASVSGHILLLILRER
MENIIGMVRRKLEYMSSRKDFILTSAAILKALGNHTGGEITRGMAYFLATGNLVTRVGLA
LQQESGFSVIAERINQLRFVSHFRAIHRGAFFMEMRTTDVRKLRPEAWGFICPVHTPDGA
PCGLLNHVTASCRIVTDLSDNSNVPSLLAELGMYTHKTVALAPPGEELYPVLMNGRFLGY
VPITKAASIERYLRCAKVAKDARIPYTSEIALVRRSTDIKNIQTQYPGIYILSDAGRLIR
PVRNLAMDAVEHIGTFEQVYLSVVLDPEEAEPGVTMHQELHPSCLFSFAGNLIPFPDHNQ
SPRNVYQCQMGKQTMGTAVHAWHSRADNKMYRLQFPQQPMLKLEAYEKYEMDEYPLGTNA
CVAVISYTGYDMEDAMTINKASYQRGFAHGTVIKVERINLVTERERKTIFYRNPREEIKT
VGPDGLPIPGRRYFLDEVYYVTFNMETGDFRTHKFHYAEPAYCGLVRIVEQGEGDSGAKH
ALIQWRIERNPIIGDKFASRHGQKGINSFLWPVESLPFSETGMVPDIIFNPHGFPSRMTI
GMMIESMAGKAAATHGENYDASPFVFNEDNTAINHFGELLTKAGYNYYGNETFYSGVDGR
QMEMQIFFGIVYYQRLRHMIADKFQVRATGPIDPITHQPVKGRKKGGGIRFGEMERDAII
AHGTSFVLQDRLLNCSDRDVAYACRRCGSLLSVLMSSRAGSHLLKKKRKDDEPLDYTETQ
RCRTCDKDDQVFLLQVPRVFRYLTAELAAMNVKIKLGIEHPSKVTGS
NT seq 3384 nt   +upstreamnt  +downstreamnt
atggactgcgacatagcgtcgtatcatgtcgattcattcgattttcttgtttcaaaagga
tgtcaatttgctgcccaagctgttcctgcagaaaaattccgtctgaaaaacggcgatgct
gttacaatgaagttcacgtcggctcaacttcataagccaacgctagataccggagcgaag
ctcaccagtgacactcttcctttacttcccgcggaatgtcgacaacgtggactgacatat
gctggaaatttaaaagttggaatcgatgtccatgtgaacggaagccggttggacattatt
gaaattattttgggaaaggtaccaattatgctccgatccgaaggttgccatctccgtgga
atgtctcgaaaggaacttgtagttgccggtgaagagccaatcgaaaaaggaggatatttc
attgtaaatggatcagaaaaagtgattagattgctgatcgcgaatcgaagaaactttcca
atcgcaattatcagaaaaacattcaaagagaaaggaaaattgttctcggaatttggagtt
atgatgagaagtgttaaggaaaatcatacggctgtaatgatgactcttcattatttggac
actggaactatgcagttagcacttcaattcagacgggaaatcttttatgtaccgttgatg
tatattgtgaaggctttaactgataagaatgatgcagtgattagtgctggattcaaaaga
ggaagaaatcaagatcaattctattcatcttgcattctcaatatgcttgctcaatgtcaa
gaagaagaaattttgaatcaagaagccgccattagagccatcggttctcgtttcagagta
gccgtatctgatagagttgctccatgggaagatgatcttgaagctggtcgattcatcatt
cgggaatgtgtacttatacatttggatagtgatgaagagaaattccatactcttgcgtac
atgacacagaaactcattgcacttgtgaaaggagaatgtgctccagagacacctgataat
ccacaattccaagaggcctctgtttcaggacatattcttttgttgattctgagagaacga
atggagaatatcattggaatggttaggagaaaattggagtacatgagttcaaggaaggac
ttcattttgacatccgccgctattctaaaagcacttggaaatcatactggtggtgaaatc
actcgtggaatggcatatttccttgcaacaggaaatcttgtgactcgtgtcggtcttgct
cttcaacaagaatctggtttctcagttatcgctgaaagaatcaatcaacttcgtttcgtt
tctcacttccgtgcaattcatcgtggtgcattctttatggaaatgcgaaccacagatgtt
agaaaattgagaccagaagcatggggatttatttgtcctgtacacactcctgatggagct
ccatgtggtttattgaatcacgtaactgcatcatgtagaattgtcactgatctctctgat
aattcaaatgttccgtcgcttcttgctgaattgggaatgtatacacacaaaactgttgca
ttggcaccgccaggtgaagagctttatccagttctaatgaatggaagattccttggatat
gttccaattactaaagctgcttcaattgagagatatctacgatgtgcaaaagttgcgaaa
gatgcaagaattccttatacttcggagattgcacttgttcgtcgatccacggatatcaag
aatattcaaactcaatatccaggaatctacattctcagtgacgctggacgtctcattcgt
ccagtacgtaatctagcaatggatgctgttgaacatatcggaacttttgaacaagtttat
ctctcagttgtacttgatccagaagaggctgaaccaggagtcactatgcatcaagaattg
catccttcttgcttattttcatttgctggaaatttaattcctttcccagatcataatcag
tcaccacgtaatgtgtaccaatgtcaaatgggtaaacaaacgatgggaaccgccgtacat
gcatggcattcacgtgctgacaacaaaatgtatcgtctacaatttccacaacaaccaatg
ctaaaactggaggcttatgagaaatacgaaatggatgaatatccattgggtacaaatgct
tgtgttgctgtgatctcctatacaggatatgatatggaagatgctatgacaatcaataaa
gcatcatatcaaagaggttttgcacatggaacagttatcaaagtggagagaattaatttg
gtgaccgagagagaacgaaaaacgattttctatagaaatccccgagaagaaatcaaaacc
gttggaccagatggtttgccgattccaggaagacgatatttcctcgatgaagtgtattat
gtcacattcaatatggaaactggagatttcagaactcataaattccattacgctgaaccg
gcatattgtggtttggtgagaattgttgaacaaggagaaggcgattctggtgcaaaacat
gctttgattcaatggagaattgagagaaatccaattatcggtgataaattcgcttcgaga
cacggacaaaaaggaattaattcattcctatggcctgttgaatcacttccattctcagaa
accggtatggtacctgatattattttcaatcctcacggtttcccatctcggatgacaatc
ggtatgatgattgagagtatggctggaaaagcggcagctacgcacggagagaattatgat
gcatcgccatttgttttcaatgaagacaacacagcaatcaaccattttggagaattactc
acaaaagcaggttataattactacggtaacgaaacattttattcgggagttgatggacgt
caaatggagatgcaaatcttctttggaattgtttattatcaaagacttcgtcatatgatt
gctgataaattccaagtgagagccactggaccaattgatccaattactcatcaaccagta
aaaggaagaaaaaagggaggaggtattcgatttggagaaatggaaagagatgctattatt
gcacatggaacatctttcgtgttgcaggaccgtcttctcaactgttcggatcgtgacgta
gcatacgcttgtcgtcgttgtggatccctattgtccgtgttgatgtccagtcgtgcagga
tcacatttattgaaaaagaaaaggaaagacgacgaaccattggactacacggaaactcaa
cgatgtcgtacgtgtgataaagatgatcaagttttcctgcttcaagttcctcgtgtcttc
cgttatttgactgccgagttagctgcaatgaatgtgaaaatcaagttgggcatcgaacat
ccatccaaagtaactggaagttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (44)   

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