KEGG   Caenorhabditis elegans (nematode): CELE_F31D4.1
Entry
CELE_F31D4.1      CDS       T00019                                 
Symbol
exos-7
Name
(RefSeq) Exoribonuclease phosphorolytic domain-containing protein
  KO
K12589  exosome complex component RRP42
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cel00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CELE_F31D4.1 (exos-7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cel03019]
    CELE_F31D4.1 (exos-7)
Messenger RNA biogenesis [BR:cel03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     CELE_F31D4.1 (exos-7)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     CELE_F31D4.1 (exos-7)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 180369
NCBI-ProteinID: NP_001370048
WormBase: WBGene00009289
Ensembl: WBGene00009289
Position
V:20838865..20841582
AA seq 312 aa
MEVHLSDDEKLFLITGAEANIRNDGRSCQDFRQIILERGVLSGTNGSCRVQLGQTTDVLA
GIKLELESYDAETEKEPKQPINFNVDFSANASSQFAGKGGDEYAEELSAAFQAAYSKALD
IMPNLAKTQLADGYRWKINVDISVLQWDGSVSDAISIAIIGALSDLEFPEGDVAPDDGGK
VRIVLKRPKVAGNVRDENVQVAMWKLDVMRCPLLLTISKIGTANLVDCTPEEECCIRSQL
LVGLAAIADSSENNEPNYDVTCVKQVGGGLLEMESIQEMLELAAKSVGGLYGALAKRLKN
EEMRKPGHSFLL
NT seq 939 nt   +upstreamnt  +downstreamnt
atggaagtccatcttagcgacgacgagaagttatttctgattactggagccgaagcgaac
attcggaatgatggacgaagttgtcaggatttcagacagattattctcgagagaggtgtt
ctgtcgggaacgaatggaagttgtcgtgttcaattaggacagactaccgacgttttggct
ggaatcaaactcgaactagaatcatacgatgctgaaacagaaaaagagccaaaacaacca
attaatttcaacgtggatttctcagccaacgcgagcagtcaattcgctggaaaaggaggc
gacgaatacgcagaggaactatcggcagcatttcaagcggcttattcaaaagcactcgat
attatgccgaatctcgcgaaaactcagctggccgacggatatcgctggaaaattaatgtg
gacatttcggttcttcagtgggacggaagtgtttccgatgcgatttctattgcaatcatc
ggagcattgagtgatttagagtttccagaaggtgacgttgcaccagatgatggaggaaaa
gtgagaattgtgttgaaacggccgaaagttgctggaaatgttcgagatgagaatgtgcaa
gttgcaatgtggaaattggatgtgatgagatgtccactgctgctgacaatctcaaaaatt
ggcactgctaatcttgtcgactgcacacccgaagaagaatgctgcattcgatctcaattg
ctcgttggattggcggcgattgcagactcttctgaaaataacgagccaaattatgatgta
acgtgtgtgaaacaagttggcggtggacttttggagatggaatcgattcaggaaatgctg
gaattggctgcgaaatctgttggtggattgtatggagctctggcaaaacgattgaaaaat
gaagaaatgaggaaaccgggacactctttcttgctctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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