KEGG   Caenorhabditis elegans (nematode): CELE_F37A4.8
Entry
CELE_F37A4.8      CDS       T00019                                 
Symbol
isw-1
Name
(RefSeq) Chromatin-remodeling complex ATPase chain isw-1
  KO
K11654  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:cel00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    CELE_F37A4.8 (isw-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cel03021]
    CELE_F37A4.8 (isw-1)
   03036 Chromosome and associated proteins [BR:cel03036]
    CELE_F37A4.8 (isw-1)
Transcription machinery [BR:cel03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    NoRC (nucleolar remodeling complex)
     CELE_F37A4.8 (isw-1)
Chromosome and associated proteins [BR:cel03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    CELE_F37A4.8 (isw-1)
   RSF complex
    CELE_F37A4.8 (isw-1)
   WICH complex
    CELE_F37A4.8 (isw-1)
   B-WICH complex
    CELE_F37A4.8 (isw-1)
   NORC complex
    CELE_F37A4.8 (isw-1)
   BRF complex
    CELE_F37A4.8 (isw-1)
   NuRF complex (fruit fly)
    CELE_F37A4.8 (isw-1)
SSDB
Motif
Pfam: SNF2-rel_dom SLIDE Helicase_C HAND ResIII DEAD HDA2-3 Myb_DNA-binding AAA_14 AT_hook
Other DBs
NCBI-GeneID: 175944
NCBI-ProteinID: NP_001379931
WormBase: WBGene00002169
Ensembl: WBGene00002169
Position
III:complement(6703988..6710100)
AA seq 1009 aa
MSVHESSNEINDEPMDTDSNIPESSGNDPSMEVDDEPESSDAADSFKRFERLLQKTENFS
HCLSSGDAKLATGAPVDTKKRGRPSKKNGIDGDHRHRKTEQEEDEEMVADAIKSDDLVIF
DKSPFYIENGEMRDYQVRGLNWLASLQHNKINGILADEMGLGKTLQTISMIGYMKHYKNK
ASPHLVIVPKSTLQNWANEFKKWCPSINAVVLIGDEAARNQVLRDVILPQKFDVCCTTYE
MMLKVKTQLKKLNWRYIIIDEAHRIKNEKSKLSETVRELNSENRLLITGTPLQNNLHELW
ALLNFLLPDIFTSSDDFDSWFSNDAMSGNTDLVQRLHKVLQPFLLRRIKSDVEKSLLPKK
EVKVYVGLSKMQREWYTKVLMKDIDIINGAGKVEKARLMNILMHLRKCVNHPYLFDGAEP
GPPFTTDQHLVDNSGKMVVLDKLLMKFKEQGSRVLIFSQFSRMLDLLEDFCWWRHYEYCR
LDGSTPHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGINLATADVVIIYDSDWNPQSDLQ
AMDRAHRIGQKKQVRVFRLITENTVDERIIEKAEAKLRLDNIVIQQGRMSEAQKTLGKGD
MISMIRHGAEQVFAAKDSTISDDDIDTILEKAEVKTAELNEKMGKIDENNLRNMTFEDNA
KFTVYQFEGENYKAKQADGMGHFWIEPPKRERKANYQVDLYYKEAMRAGNPTEKQSKAPR
PKLPQVFDFQFYPRRLFELLDKEIYHYRKTIGYVAERPKDVPPKEAEKRQAEEQKLINNA
RPLTDKEQEEKAELLTQSVTDWTKREFQQFVRGNEKYGREDLESIAKEMERPLEEIQSYA
KVFWERIEELQDSEKVLSQIEKGEARIQRKYAVKKALDAKIAKYKAPFQQLRISYGTNKG
KTYTEEEDRFLVCETHRLGHDKENVFEELRQSVRMAPQFRFDWFLKSRTAMELQRRCNTL
ITLIEREMGEVVESKPVIVTAADKKKSVAKDLSKSSGTPTAKKVKATPK
NT seq 3030 nt   +upstreamnt  +downstreamnt
atgtcggttcacgagtcttcgaacgaaataaatgacgagcctatggacaccgattccaac
atcccggagtcttccgggaacgatccctcaatggaagtggacgatgaaccggaatcgtcc
gacgccgccgattccttcaagagatttgaaagattgttacaaaaaacggaaaacttctca
cattgtttatcatctggagatgcgaaattagcaactggagccccagttgacaccaaaaag
cgtggacgcccctcgaagaaaaacggaatagacggagatcatcgacacagaaaaactgag
caagaagaagatgaagaaatggtggccgatgctattaaaagtgatgatttggtgattttc
gacaaaagtccgttttacatcgagaatggagaaatgagagattaccaagttcgtggactc
aactggctcgcatcccttcaacataataaaatcaatggaattttagctgacgaaatggga
ctcggaaaaacactccaaacgatttctatgataggatacatgaaacattacaaaaacaag
gcgtctccacatcttgtcattgttccaaaatccactcttcagaactgggctaacgagttc
aaaaagtggtgcccatcgattaatgcggttgttctgattggagatgaagcagcgagaaat
caagttctgcgcgatgttattcttccacaaaaattcgatgtttgctgcacaacctatgaa
atgatgctgaaggtcaaaactcaattgaaaaagttgaattggagatatatcattattgat
gaagcacatcgtatcaagaatgagaaaagcaaactttctgaaacagttcgagaactcaac
tctgagaatcgattgttgataacaggaactccactgcagaacaacttgcacgagctgtgg
gctcttttgaatttcttgctgcctgacattttcacctcttctgatgattttgattcctgg
ttttctaatgatgcaatgagcggaaatactgatctggtgcaacggcttcataaggttctt
caaccattccttcttcgtcgtatcaagtctgatgttgagaaatctttgttaccaaagaaa
gaagtgaaagtgtatgttggattatcgaaaatgcaaagagaatggtacacgaaggttctc
atgaaagatatcgatattatcaatggagccggtaaagtcgagaaggctaggcttatgaat
attcttatgcatctccgaaaatgtgtcaaccatccttatctcttcgacggtgctgaaccg
ggaccacccttcaccacagatcaacatcttgtcgataattctggaaagatggttgttctc
gataaattgctaatgaagtttaaagaacaaggatctcgagttcttatcttctctcagttc
tcccgaatgctcgatttacttgaagatttttgctggtggcgtcattatgagtactgccgt
ctggatggatcaactcctcacgaggatcgatctaacgcaattgaggcatacaacgctcca
gactcgaaaaagttcattttcatgcttactactcgcgctggaggtcttggaatcaacttg
gctaccgctgacgttgtgatcatctacgactctgattggaatccacaatcagatcttcag
gcaatggacagagctcatcgtatcggtcaaaagaaacaagttcgtgtgttccgactgatc
acagagaatacagtcgatgaaagaattatcgaaaaggctgaagccaagcttcgccttgac
aatatagttattcaacaaggtcgtatgtcggaagcccagaaaactcttggaaagggtgat
atgatcagcatgatcagacacggagccgaacaagtctttgctgccaaggattcaacaatt
agtgatgacgatattgatacaattcttgaaaaagctgaagtaaagactgctgaattgaat
gagaaaatgggcaagattgatgagaacaatcttcgtaacatgacgttcgaggataacgct
aaattcacagtatatcagttcgaaggtgaaaattataaagcaaagcaagccgacggaatg
ggtcatttctggattgaaccaccaaagagagaacgaaaggccaattatcaggtagatctt
tactacaaggaagcaatgcgagctggaaatccaactgaaaaacaatccaaggcgcctcgt
ccgaagctcccacaagtttttgatttccaattctatcctcgtcgtctatttgaacttttg
gacaaagagatttatcattatcgcaagacaatcggatatgtggctgaaagaccgaaggat
gttccaccgaaagaggctgaaaaacgacaggccgaggagcagaaactgataaacaatgct
cgaccattgactgacaaggaacaagaagaaaaagctgagcttttgactcagtctgtcaca
gactggacaaaacgcgagttccaacagtttgttagaggaaatgaaaagtatggtcgtgaa
gatttggagagtatcgcgaaggaaatggaacgtccacttgaagagattcaatcttacgct
aaagttttctgggaacgtatcgaagagcttcaggactctgaaaaagtgctcagtcaaatt
gagaagggcgaggcacgaattcaacgaaaatatgctgtgaagaaggcgcttgacgctaaa
atagcaaagtacaaggctccgtttcaacagttgcgtatttcctatggtacaaataaagga
aaaacgtacaccgaagaagaggatcgattcctggtttgtgagactcatcgattgggacat
gataaggaaaatgtgttcgaagagctgcgtcagtctgttcgcatggcaccacaattcaga
tttgattggttcctgaagagtcgtacagcaatggagcttcaacgccgttgcaatactctt
attactttgatagaacgtgaaatgggagaagttgtggagtcaaagcctgtcatcgtgacc
gctgccgataagaagaaatctgtcgctaaggacctgtcaaagagtagtggaactccaact
gctaagaaagtcaaagctactcctaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (37)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (60)   

Download RDF
DBGET integrated database retrieval system