KEGG   Caenorhabditis elegans (nematode): CELE_F38E11.5
Entry
CELE_F38E11.5     CDS       T00019                                 
Symbol
copb-2
Name
(RefSeq) putative coatomer subunit beta'
  KO
K17302  coatomer subunit beta'
Organism
cel  Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:cel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cel04131]
    CELE_F38E11.5 (copb-2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cel04147]
    CELE_F38E11.5 (copb-2)
Membrane trafficking [BR:cel04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    CELE_F38E11.5 (copb-2)
Exosome [BR:cel04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   CELE_F38E11.5 (copb-2)
SSDB
Motif
Pfam: Coatomer_WDAD WD40 ANAPC4_WD40 NBCH_WD40 Clathrin
Other DBs
NCBI-GeneID: 177779
NCBI-ProteinID: NP_501671
WormBase: WBGene00009542
Ensembl: WBGene00009542
UniProt: Q20168
Position
IV:9459731..9464020
AA seq 1000 aa
MPLRLDVKRKLLARSDRVKCVDLHPVETWLLAALYNGNVHIWNYETQTLVKSFEVCDVPV
RAAKFVPRKSWVVTGSDDMHIRVFNYNTLERVHQFEAHSDYLRSLVVHPTLPYVISSSDD
MLVKMWDWDNKWAMKQSFEGHTHYVMQIAINPKDNNTFATASLDKTVKVWQFGSNVPNFT
LEGHEKGVNCVDYYHGGEKPYIISGADDHLVKIWDYQNKTCVQTLDGHAQNVSSVCFHPE
LPLIITGSEDSTVRLWHANTYRLETTLNYGLERVWCIQAQKGANTIAIGYDEGSVTLKLG
REEPAVSMDSSGKILWAKHSEIQQANLKTISTEESEAIQDGERLPLSVKDLGSSEIYPQT
LAHSSNGRFVVACGDGEYIVYTAMALRNKDFGQGLEFVWAVDPNMFAVRESATNVKIKKN
FKDHKSIRSDMVLEGISGGPLLALRSNNSLCFFDWESAVLVRRIEITSKSIYWSDNGEMV
AICGDDSFYVLKYSAEAVANATEVTEDGIEDAFEVIGEQAEAVKTGFWIGDCFIFTTALN
RINYYVGGEIVTIAHVDRPLYLLGYMAKESRVYAVDKDLNVISYKLLLSVLEYQTAVMRR
DFDTADKVLTTIPKEQRTRVAHFLEKQGFKKQALAVSQDPDHKFDLSVALGDLKTAYDLA
LQSDSEEKWKALSNAATLKSELLLAGECLGRARDFGGLMLLATCAGSAPLLQKLADDSAA
AESHNISFLSSLLLGDIDACLDKLISTGRLPEAAFLARTHAPSRVSSILELWKAKASGHS
EKSSRKIGESLADPVKYENLFPGFTQSLKAESFVREISKIPVPASVRVPSAATRNIQEEL
DEAVASGAVSFTDDGQAVLKNAPRQTETQLKAPPPPSVARQPSPVRQPSPIREPSPIREP
EPEEEEEQEEFDDDQQEVHVPANQESADAHGTSKTPDVVLETSRPDIVPPRGSAAPDLVS
ASSQQSAQDFQDDTQWSDEDFGDAENGDLNMDDLNLDEED
NT seq 3003 nt   +upstreamnt  +downstreamnt
atgcctctccgacttgatgtaaaaagaaagcttctggctcgttcggaccgcgtgaaatgt
gtcgacttgcatccagtcgaaacatggcttctagctgctctttacaatggaaatgttcac
atctggaattacgaaacacaaacgcttgtaaagtcatttgaagtgtgtgacgtaccagtt
cgtgcagcgaagttcgttccaagaaagagctgggttgtcacgggatctgacgatatgcat
attagagttttcaactacaacacattggaacgagttcatcaattcgaagcacattctgat
tatctccgatcgctcgttgttcatccaacacttccctacgtcatttcatcatccgacgac
atgcttgttaaaatgtgggattgggataacaaatgggcaatgaaacagtcattcgaaggg
catactcattatgtcatgcagattgccatcaatccaaaagataataacacttttgcaact
gcttctcttgacaaaactgtcaaagtatggcagttcggatcgaatgttccgaatttcact
ttggaaggacacgagaaaggagtcaactgtgtcgattactatcatggtggagagaaacca
tacattatttctggagctgatgaccatctggtcaagatttgggattaccaaaataaaacg
tgtgtgcaaacgctcgatggacatgcgcaaaatgtgtcttcagtttgtttccacccagaa
ctgccattgataatcacaggatccgaagactccactgttagattgtggcatgcaaacacc
tacagactggaaacaaccttgaattatgggttggaacgtgtttggtgcatccaagctcaa
aaaggagccaacactattgccatcggatacgacgaaggttccgtcacgttgaaattaggc
cgagaagaaccagcagtcagtatggattcgtctggaaagattttgtgggcaaagcactcc
gaaattcagcaagctaacctgaagacaatctcaactgaagagtcggaagccattcaagat
ggagaacgtctgccgctttctgtaaaagatctcggatcttctgaaatctatccacaaacc
cttgctcattcatctaatggacgttttgttgtcgcttgtggtgacggagaatacattgtt
tatactgcaatggctctcagaaacaaggatttcggacaaggactcgagtttgtctgggct
gttgatccaaatatgtttgctgtccgtgaatctgccaccaatgtgaagataaagaagaac
ttcaaggatcacaagtcaattcgttcagatatggtacttgagggaatttctggtggacca
cttcttgccttgagatcgaacaactctttgtgcttctttgattgggaatcagccgttctt
gttcgtcgtatcgaaattacttccaagagcatctattggagtgacaacggagagatggtc
gcaatttgtggagatgattcattctacgttctcaagtacagtgctgaagcagttgccaat
gcaacagaagtgaccgaagacggtattgaagacgcgtttgaggttattggagaacaggca
gaagctgtgaagacgggattctggatcggggactgctttattttcaccactgcactcaat
agaatcaactattatgtcggtggagaaattgtcactattgctcatgttgatagaccactt
tatttgttgggatacatggctaaggaatctcgagtctatgccgtcgataaggatctcaac
gtgatctcatacaaacttcttctatctgttcttgaatatcaaactgctgtaatgcgccgt
gacttcgatactgctgacaaggtacttactacaattccaaaagagcagagaactcgtgtt
gctcatttcctcgaaaagcaaggattcaagaagcaggctcttgcggtctctcaagaccct
gatcacaaattcgatctctcggtagctcttggagatttgaagactgcctacgatttggca
ctgcaaagcgattcagaagagaaatggaaggctctcagcaacgccgccactcttaagtcg
gaacttcttcttgctggtgaatgtcttggaagagctcgcgatttcggaggtctaatgctt
cttgcaacgtgtgccggatcagctcctcttcttcagaaacttgcggatgactctgctgct
gccgaaagccacaatatcagcttcctcagtagtttgcttcttggagatattgatgcttgt
ctagacaaacttatttcgactggtcgcctcccagaagcagcgttccttgctcgaacacat
gcgccgtctcgagtttcatctattcttgaattgtggaaagccaaggcttcgggacacagc
gaaaagagtagcagaaagattggagaatctcttgccgatccagtgaagtatgaaaacttg
ttccctggatttacccaatcactgaaagcagaatctttcgttcgtgagatctccaagatt
ccagtcccagcatccgttcgagtgccatcagctgctacccggaatattcaagaggaattg
gatgaagctgttgcttcgggagcagtttcttttactgatgatggccaagcagtacttaag
aatgccccaagacaaaccgagacacaattgaaagctccacctcctccatcagttgcacgt
caaccctcgcctgtacgccagccatcccctattcgtgagccatcaccgatccgcgaacct
gaacctgaagaagaggaagaacaggaagaattcgatgatgatcagcaagaggtgcatgtt
ccagctaatcaagaaagtgccgatgctcatggaacatctaaaactcctgatgttgttctt
gagacaagccggcctgatattgtcccaccacgggggtccgccgctccagatttggtttcc
gcgtcttcacaacaatctgctcaagatttccaagatgatacgcaatggtcagatgaagat
tttggagatgctgaaaatggagacctgaatatggacgatctaaatttagacgaggaagat
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (38)   

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