KEGG T00019: CELE

Caenorhabditis elegans (nematode): CELE_F40F12.5

Entry

CELE_F40F12.5 CDS T00019

Gene name

cyld-1

Definition

Protein CYLD-1, isoform A

Orthology

K08601

ubiquitin thioesterase CYLD [EC:3.1.2.15]

Organism

cel Caenorhabditis elegans (nematode)

Class

SSDB

Motif

Pfam:

CAP_GLY UCH_1

Other DBs

NCBI-GI:

NCBI-GeneID:

WormBase:

UniProt:

Position

III:complement(join(9898910..9899059,9899222..9899882,9899955..9900203,9900251..9900731,9900805..9901213,9901502..9901637,9901688..9901836,9902479..9902638,9902683..9902785,9903731..9903815,9906860..9906964,9909000..9909108,9909152..9909228,9909509..9909634,9910028..9910267,9910322..9910479,9910532..9910568))

AA seq 1144 aa
MPGEFAKFPEQSAGSHQFRNPLDELTGSNTITNLTAHDFDYFTQSEKNSNLYTSENTSNS
NRLNLNQNIPVGTLIDGFELINEASGSGFLDDQLVDVSDYSRDRTTKLDRNRNSPELIVA
LLQRKVQGIRFSSNYGREEEPCVIEIPPGTMVREMADDDWKMSELKEWFTKSRASSHLRD
GLAMPMEELDCTPLICAMITRSDVMRINQDQAIHLLAVSVEKRIEVYQNFEWFNFILNLK
IGDSVSVEVDETMRRVPAKVSWIGERPEASGIWYNVDFDGNTSQWPSSNQSYSSSHDRLN
RQFDTNWNFEMSGSSSVAPSNSRLYYSPNQMHMPMKGGGVSALYDNRRLVQYSGDEEQYR
SAPKPAPRERIIPVSRQQPEIEQRNSRSMKPSEPDYNTYSTHPPRPPPSSSMNYPSMSNT
HSLQPSRSKSVQTIQRNQFVRQNPAERNERVESDQLNFRIGDQCIWNNNGAEERGIIKYI
GFLKGHKTLYAGVEFKNTIGAGTGVFNREQLFLAKDGHAGFVELSSLESPSSSISSTSTS
SSQHRRRLSSSRSQQMPAASGTSISVPVNGRHNVNGKQASIESLSDPPPPPYAPPSPPRA
SSAAAAHQQPPPLPPKPLARVEDFLIDSYDIGSHVVVRHLGAQRTGVVRWLGEEIDDEGD
RIVRSAIVQLDEDVPTAWRRSHDASSYTGSPVVGGVLVPIQSLKHNHSGSSSNGASVVQT
STYPTSQTYNNISRRTEDFGSMDSGVEKQKCGIAKDMQQLVGRQKGIQGYCNSCYLDATL
YAMFVQTTCFDFLLEKSIKGSETAQQFQKILAHEIVFPLRKVHYVRADHVMKLRKLLAEL
MPHVTGLTNEEKDPEEILGFIFSKVFHAEPFIKLIGQNHAKDSQYLVPIVVDDWLGGAAT
SQHLLERHMRSAQVTFAKAPPVLIMQLPRYGQQKVFDKILPLETIDITPFVAGAVPACSK
CQACSEVYCPTCFLTRRVFYSEVIFCRKCFHHTHLLPEIEDHKSRDLYPPGKPQKKPHSH
KMVLSAVLCIETSHYVAYVRTSSNQWVFFDSMADREGLSDGFNVPVVRECGNMSDWLSLQ
GWNRLKDADECGQIKAMFGKQSSLDPLVGRLLSDSYICFYEDASPTSSSSSSSTIISSIK
NMMN

NT seq 3435 nt +upstreamnt +downstreamnt
atgcccggcgaatttgcaaagtttccggagcaatcagctggatctcatcaatttcgtaac
ccactcgatgaacttacgggatcaaatacaataacaaatttaactgcacacgattttgat
tattttacacagtccgagaaaaattcaaatttatatacaagtgaaaatacaagcaattct
aacagattaaatctcaatcaaaatataccggtcggcacattaatagatggatttgagctt
attaatgaagcttctggctccggctttttagatgatcaattagtggatgttagcgattat
agccgagataggacgacgaagctggataggaataggaattctcccgagctaatagttgct
cttttgcaacgaaaagttcaaggaattcgattttcatcgaattatggaagagaggaagaa
ccatgtgttattgagatcccaccaggaacaatggttcgcgaaatggcagatgatgattgg
aaaatgtctgaattaaaagaatggttcacaaaatcaagagcttcttcgcatttacgtgat
ggattagcaatgcccatggaggaactcgactgcactcctctgatttgtgcaatgattacc
agatccgatgtaatgagaataaaccaagatcaagcaatacatcttctggctgtcagtgta
gagaaacgaatagaagtttatcaaaatttcgaatggttcaatttcattctgaatctgaaa
attggcgattctgtttctgtggaagtggacgaaacaatgcgacgggttccagcaaaagtg
tcgtggatcggtgagagaccggaagcatcaggaatatggtataatgtggactttgacggg
aacacttctcagtggccttcttcaaatcaatcatattcatcatcccatgaccgactgaat
cgtcaatttgatacgaattggaattttgaaatgtctggatcttcttcagttgcaccttcc
aattcccgtctatattattcacccaatcaaatgcatatgccaatgaaaggcggtggagtg
tcagctctatacgataatagaaggcttgtgcaatattctggagatgaagaacaatatcga
agtgcaccaaaaccggctccaagagaacgaattattccagtttcaaggcaacaaccagaa
attgaacaacggaatagtcgatctatgaaaccttctgaaccggattataatacttattcg
actcatccaccacggccgccaccatcatcatcaatgaattatccatctatgtcaaataca
cattcattacaaccaagtcgaagtaaaagtgttcaaacaattcaaagaaatcaattcgtt
cgacaaaatcctgcagaaagaaatgaacgagttgaaagtgatcaactgaactttcgaatt
ggtgatcaatgtatttggaataataatggagctgaggaaagaggaattattaaatatatt
ggtttcttgaaagggcacaaaacattatatgctggtgtcgaatttaaaaacacaattgga
gcaggcactggtgtcttcaatcgagaacagctattccttgctaaagatggtcatgctggt
ttcgttgaactttcttcactggaatcaccatcctcttctatatcatccacgtctacatca
tcatctcagcatcgtcgtcgattatcttcctcgaggagtcaacagatgccagctgcatcg
ggaacttccattagtgtcccggttaatggacgtcacaatgtgaatggaaagcaagcgtcg
atagaatcactttcggatcctccaccaccaccgtacgcaccgccatctccgccaagagca
tcgtctgccgctgcggctcaccagcaaccaccgcctttgcctccgaagccattagctaga
gtggaagattttctgattgattcgtatgatattggaagtcatgttgttgtcagacatctt
ggagcacaacgtacaggagttgttcgatggctcggcgaggaaattgacgacgaaggagat
cgaattgttcgttcagcgattgttcaactggatgaggatgttccgacggcttggcgtcga
agtcatgatgcttcctcgtacactggttctccagtagttggaggtgttcttgttccgatt
caatctctgaagcacaatcattcgggatcgtcttccaatggagcttctgtagttcagact
tcaacctatccaactagccaaacgtataataacatcagccggcgaactgaagatttcgga
agtatggattcaggagtggagaagcaaaaatgtggaattgcaaaggacatgcaacaatta
gttggcaggcagaaaggaattcagggttactgtaactcgtgttatctggatgccacgttg
tatgcaatgtttgtccaaaccacttgctttgattttcttcttgaaaaatcgatcaaagga
tcagaaacggctcaacaatttcaaaaaattctggcccacgagatcgtgttccctcttcga
aaagttcattatgtgcgagcggatcatgtcatgaaacttcgaaaattgctcgctgagctc
atgccgcatgtaacagggcttacaaatgaagaaaaagatccagaagagattcttggattc
atattctccaaagttttccatgctgagccattcataaagttgatcggacaaaatcacgca
aaagattctcaatatcttgtaccaattgtggtggatgattggctgggaggtgcagcaact
tcacagcatttgctcgaacggcatatgagatcagctcaagtaacatttgcaaaagctcct
ccagtattgattatgcaattaccaagatatggacaacagaaagtgtttgataagattctt
cctctggaaacaattgacattactccgttcgttgctggagcggttccggcttgttcaaaa
tgtcaagcatgctcagaagtctactgcccgacgtgtttcctgacgagaagagttttctat
tcggaagtgatattctgcagaaaatgtttccaccatacacatcttttgccggaaattgaa
gatcacaagagtcgagatctctacccacctggaaaaccacaaaagaaaccacactcccac
aaaatggttctctcagcggttctgtgcatagaaacatctcattacgttgcttatgttcga
acttcatcgaatcaatgggtattctttgattcgatggctgatcgagaaggactatctgat
gggttcaatgttccagtggtcagagaatgtggaaatatgtccgattggttatcactgcaa
ggatggaatcgtttgaaggatgctgatgagtgtggacagattaaggcaatgttcggcaaa
caatcatcgttggatcctctggtaggacgtctcctttccgacagttatatttgtttctac
gaggacgcctcaccgacatcttcgtcatcttcctcctctaccatcataagctcgattaaa
aatatgatgaactag

All links

Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (6)   
   UniProt (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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