KEGG T00019: CELE

Caenorhabditis elegans (nematode): CELE_F41H10.6

Entry

CELE_F41H10.6 CDS T00019

Gene name

hda-6

Definition

Protein HDA-6, isoform B

Orthology

K11407

histone deacetylase 6/10 [EC:3.5.1.98]

Organism

cel Caenorhabditis elegans (nematode)

Class

SSDB

Motif

Pfam:

Hist_deacetyl zf-UBP CENP-R

Other DBs

NCBI-GI:

NCBI-GeneID:

WormBase:

UniProt:

Position

IV:complement(join(5356604..5356795,5357127..5357414,5357868..5358149,5358662..5359024,5359084..5359218,5362168..5362627,5362923..5363477,5363528..5363796,5363846..5364133,5364178..5364213))

AA seq 955 aa
MLFEDRQKNRSTGPTLIGFNQTQNEHENTVCPTHPESSDRILKIKEALTKTKILEKCTVL
TNFLEIDDADLEVTHDKSMVKDLMESEKKTQEDINSQCEKYDSVFMTENSMKVAKDGVAC
VRDLTNRIMANEASNGFAVVRPPGHHADSVSPCGFCLFNNVAQAAEEAFFSGAERILIVD
LDVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHIGSGKGLGYNANLALNE
TGCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDGYSHILYHLK
SLAQGRMLVVLEGGYNHQISAVAVQRCVRVLLGYAPFSIELNEAPKESTVDSCVSLVSVL
RHHWNCFDYFPSRTSLRLAQWPIVNTKVIYNYDPTTRRADTGEIIQDELASTEFTASDVI
PTENMETLIYFNEGDDAHFDLEEDNHPEKPARTRRILKTLRESGVLEKCVDRNCERIATN
EEIRLVHTKKMLEHLRTTETMKDEELMEEAEKEFNSIYLTRDTLKVARKAVGAVLQSVDE
IFEKDAGQRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVH
HGNGTQEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPFSGVQMG
DNEYQMAFQRVIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSSLAG
GRIITVLEGGYNLTSISNSAQAVCEVLQNRSMLRRLREEKEQFATKPQKIESSCIKTIRE
VCAVQQKYWSILKGFQVTPSNYGLDIDDEAYDDDSIDMADQSSSSGSSSSSTRPSHNLEI
MDSGPAHAVVPLATCPHLKEVKPLPPAKINARTACSECQIGAEVWTCLTCYKYNCGRFVN
EHAMMHHLSSSHPMALSMADLSVWCYPCDSYVHNPALIGAKSAAHESKFGETMPS

NT seq 2868 nt +upstreamnt +downstreamnt
atgcttttcgaagataggcagaaaaatcgatcaacgggtccaacactcatcggattcaat
caaactcaaaatgaacatgagaatacagtatgcccaacacatccggagtcttcggatcga
attttgaagattaaagaggcattaacaaagacgaaaatactcgaaaaatgcactgtacta
acaaattttctggagatcgacgatgctgacttggaagtaacccacgataaaagcatggtt
aaagatttaatggaatctgaaaagaaaacacaagaagatattaattcacagtgcgaaaaa
tatgattccgtgtttatgacagagaactcgatgaaagttgccaaagatggtgtcgcgtgt
gttcgagatttgacgaatagaatcatggctaatgaagcttcgaatggttttgcagtcgtc
aggccacccggacatcatgcagattctgtatcgccttgtggtttctgcttattcaataat
gtcgcccaagccgccgaagaagcatttttcagtggagccgaacggattttgattgtcgat
ttggatgtacaccacggacacggaactcagcggattttttatgatgataaaagagtacta
tatttctcaattcatcgccacgaacatggtctcttttggcctcatcttcccgaatcagat
tttgatcatattggatcaggaaagggattgggatacaacgcaaatctggctttaaatgaa
actggatgcactgattctgattatctatcgattattttccatgttctacttcctcttgca
actcagtttgatccacattttgtgataatctctgctggattcgacgcacttctcggtgat
cctttaggtggaatgtgtcttacacctgatggttattcacatattttatatcatctgaaa
tcacttgcacagggaagaatgttggtcgtattggaaggaggttacaatcatcaaatctct
gcagtcgctgttcaaagatgtgtgagagtactgctcggatatgctccattttcaattgaa
ttgaatgaagcaccgaaagaaagtacggttgattcatgtgttagccttgtttccgttctt
cgacatcattggaactgcttcgactattttccgtctcggacttcactaagattggctcag
tggccgattgtgaacacaaaagtaatctacaactacgatccaacaactcgtcgtgccgac
actggtgagattattcaagatgaacttgcatccactgagttcacagcttccgatgtgata
cccactgaaaatatggaaacattgatttatttcaacgaaggagacgatgctcatttcgat
ttagaagaggacaatcatcccgagaagccggcacggacacgtcgaattctgaagacactg
cgagaatctggagtactggagaagtgtgtggataggaattgtgaaaggattgcgacgaat
gaggagattcgattagttcacacgaagaagatgctggaacatttgaggacgactgaaact
atgaaggatgaggaattgatggaagaggctgaaaaagaattcaatagtatttatttaaca
agagatactctgaaagttgcacgaaaagctgtcggcgcagtgttacagtctgtcgatgaa
atcttcgaaaaagacgctggtcaacggaatgctcttgtgatagtccgcccacccgggcac
catgcgtctgcttcgaaatctagtggattctgtattttcaacaatgtggcggttgcggca
aagtacgctcaacgtcggcacaaagcgaaacgtgttctgattctcgactgggatgttcat
cacggtaacggaactcaggagatcttctatgaggatagtaatgtgatgtatatgtcaatt
catcgtcacgataaaggaaatttttatccaattggtgaaccaaaagattattctgatgtt
ggagaaggtgctggagagggaatgtcggtgaatgttccatttagtggagttcaaatggga
gataatgaatatcaaatggcatttcaacgagttattatgccaattgcataccaatttaat
ccggatcttgttctcatttctgctggattcgatgcagctgttgatgatccattgggagag
tataaggtgactccagaaacatttgccctaatgacttatcaactatcatcacttgccggt
ggacgtattataactgtcctagaaggtggatataatcttacttccatttcaaatagtgct
caagctgtctgcgaagttctacaaaatcgttcaatgctccgacggttacgagaggaaaaa
gagcaatttgcgacgaaacctcaaaaaatcgagtcatcatgcatcaaaacgattcgagaa
gtttgtgcagttcaacagaaatattggagtattctgaaaggttttcaggtaactccttct
aattacggactcgatatcgacgacgaagcctacgacgacgattcaatagacatggctgat
caatcgtcttcatctggatcttcatcatcatcaactcgaccatctcataatcttgaaatt
atggattcgggaccagcacacgccgttgttccacttgccacgtgtccacatttgaaagaa
gttaagccactgccgccagccaaaatcaatgctcggacagcttgctccgagtgccaaatt
ggggcagaagtgtggacttgtctcacttgttataagtataactgtggtcgttttgtcaac
gaacacgcaatgatgcaccatctctcatcatctcatccaatggctctttcaatggctgat
ctctctgtttggtgctatccatgtgattcttacgttcataatccagcacttatcggtgca
aaatcagcagctcacgagagcaaattcggtgaaacaatgccttcctaa

All links

Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (7)   
   UniProt (3)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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