KEGG   Caenorhabditis elegans (nematode): CELE_K02F3.12
Entry
CELE_K02F3.12     CDS       T00019                                 
Symbol
K02F3.12
Name
(RefSeq) Putative ATP-dependent DNA helicase Q1
  KO
K10899  ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
Organism
cel  Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:cel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cel03400]
    CELE_K02F3.12 (K02F3.12)
Enzymes [BR:cel01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CELE_K02F3.12 (K02F3.12)
DNA repair and recombination proteins [BR:cel03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     CELE_K02F3.12 (K02F3.12)
SSDB
Motif
Pfam: DEAD Helicase_C RecQ_Zn_bind ResIII GPS2_interact COG2 TMF_TATA_bd HEM4 DUF2730 DUF5082 Spc24
Other DBs
NCBI-GeneID: 175246
NCBI-ProteinID: NP_001022656
WormBase: WBGene00019334
UniProt: Q9TXJ8
Position
III:856560..>860090
AA seq 631 aa
MATFIFSRGNIFFYVNKITIPDLMSDVLLSKLSTELADLDGEIGQIDQQISQLRRKKSEL
TQKRQAIERKIELKTNEDSDVVTDRWDRDGFPWSDEATKILKEQFHLEKFRPLQRAAINA
VMSKEDAVVILSTGGGKSLCYQLPALLANGLALVVSPLISLVEDQILQLRSLGIDSSSLN
ANTSKEEAKRVEDAITNKDSKFRLLYVTPEKLAKSKKMMNKLEKSLSVGFLKLIAIDEVH
CCSQWGHDFRTDYSFLNVLKRQFKGVPILGLTATATSNVLDDVKDMLGIQAALTFRAGFN
RSNLKYKVVQKPGSEDECTEEIAKTIKRDFAGQTGIIYCLSRNDCEKVAKALKSHGIKAK
HYHAYMEPVDRSGAHQGWISGKIQVIVATVAFGMGIDKPNVRFVIHHSLPKSIENYYQES
GRAGRDGQPATCILYYRLADIFKQSSMVQQERTGIQNLYNMVRYAADSSTCRRVKLAEHF
EEAWEPSWCQKQCDTCENGNGFVGTSSKESTDVSEAAKTTVRIIEEHLNSAKDGSGRITG
NKLVELLTKKLKGSRNREFCEKLIVNLLLEGYLQEDFHYTVYSVISYVVIGSKWRVYNGK
DAIKMRHVEESKSRKRKASSSVEEEDVMVLD
NT seq 1896 nt   +upstreamnt  +downstreamnt
atggctactttcatattttcacgtggaaatatcttcttttatgtaaacaaaataactatt
ccagatctcatgagcgatgttctgctctccaagttgtccacagagcttgccgatctcgac
ggagaaatcgggcagattgatcaacaaatcagccaattaagacgaaagaaatcggaatta
actcaaaaaaggcaggctatcgagcgaaaaatcgaactaaaaacgaatgaagactcggat
gttgtgacggatcgttgggatcgagatgggttcccatggtccgatgaagctacaaagatc
cttaaagaacaatttcatttggaaaagttcagacctcttcagagagccgcaatcaatgca
gtaatgagtaaagaagatgcagttgttatcttaagcacaggcggtggaaagagtctttgt
tatcagcttccagcattacttgcaaatgggctggcactcgtcgtttctccattaatttct
ctcgttgaagatcaaattctacaattgagaagtctcggtatcgattcttcaagtcttaat
gccaacacatcaaaagaagaagctaaacgagtggaggatgcgatcacaaataaagattca
aagtttcgacttctctatgtaactcctgaaaagctggccaaatcgaaaaaaatgatgaat
aagctggagaagtcactatccgtaggctttctgaagcttatcgcaatcgatgaagtacac
tgttgttcgcaatggggacatgattttagaactgattattcgttcttgaatgttctcaaa
agacagttcaaaggtgtcccgatccttggactcaccgccactgccaccagtaatgttctc
gacgatgtgaaggatatgctcgggatccaagcagctctcacattccgtgccggattcaac
agatcaaatttgaagtataaagtggttcaaaaaccaggatccgaagacgagtgtaccgag
gaaatcgcaaagaccatcaaaagagattttgccggacaaactggcatcatttactgccta
tcacgaaatgattgtgaaaaagtggcaaaagcgttgaaatcgcatggaatcaaggcaaaa
cactatcatgcctatatggaacctgtcgatcgaagtggagctcatcagggttggatttcc
ggaaaaattcaagtgattgtggcgactgtcgcattcggaatgggcattgataagccaaat
gttcgattcgtcattcatcactcgttgccaaaatctattgaaaattactaccaggaaagt
ggaagagcaggtagagatggacagcctgccacgtgtattctatattatcgactcgcagat
atctttaaacaatcgtcaatggtacaacaagaacgaacgggtattcagaatttgtataat
atggttagatatgcggctgattcgagcacatgtcgacgggtaaagcttgcggagcatttt
gaagaagcttgggaaccatcttggtgtcaaaagcagtgtgacacttgtgaaaatggaaat
ggattcgttgggacttcttcaaaagaatctacagatgtcagtgaagcagccaagacaacc
gttcgtataatcgaggaacatctgaactcggcaaaagatggaagtggaaggatcactgga
aataagctcgtcgagctcctcacgaagaaattaaaaggatcgagaaatcgagagttttgt
gaaaagctgattgtcaatcttttgctagaaggctatcttcaagaagatttccattatacc
gtatattcagttatcagctatgtggtaatcggatcgaaatggcgggtttataatggaaaa
gatgcgattaaaatgagacatgttgaagaatcgaaaagccggaaaagaaaagcatcaagt
tcagttgaagaagaagatgttatggttctggattaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (11)   
   Pfam (11)   
All databases (58)   

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