KEGG   Caenorhabditis elegans (nematode): CELE_K08H2.1
Entry
CELE_K08H2.1      CDS       T00019                                 
Symbol
skr-21
Name
(RefSeq) SKP1 component POZ domain-containing protein
  KO
K03094  S-phase kinase-associated protein 1
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel03083  Polycomb repressive complex
cel04120  Ubiquitin mediated proteolysis
cel04141  Protein processing in endoplasmic reticulum
cel04310  Wnt signaling pathway
cel04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:cel00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    CELE_K08H2.1 (skr-21)
   04120 Ubiquitin mediated proteolysis
    CELE_K08H2.1 (skr-21)
  09126 Chromosome
   03083 Polycomb repressive complex
    CELE_K08H2.1 (skr-21)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    CELE_K08H2.1 (skr-21)
   04350 TGF-beta signaling pathway
    CELE_K08H2.1 (skr-21)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cel04131]
    CELE_K08H2.1 (skr-21)
   04121 Ubiquitin system [BR:cel04121]
    CELE_K08H2.1 (skr-21)
   03036 Chromosome and associated proteins [BR:cel03036]
    CELE_K08H2.1 (skr-21)
Membrane trafficking [BR:cel04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    CELE_K08H2.1 (skr-21)
Ubiquitin system [BR:cel04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Adaptor protein
     CELE_K08H2.1 (skr-21)
   Cul7 complex
     CELE_K08H2.1 (skr-21)
Chromosome and associated proteins [BR:cel03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     CELE_K08H2.1 (skr-21)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     CELE_K08H2.1 (skr-21)
SSDB
Motif
Pfam: Skp1_POZ Skp1
Other DBs
NCBI-GeneID: 54162166
NCBI-ProteinID: NP_001366771
WormBase: WBGene00004827
Ensembl: WBGene00004827
Position
X:complement(<13226134..>13226664)
AA seq 176 aa
MVIGQIKPVFKIQSCDGQVFAVEDWFIQKSKCFSVVLAQMNNLVQPHPLKTSICSFVLVK
IIEWCYHHRNEDQDHAQRILTAWDVQFIRTNSAILLHLAEAAFRLEIVGLLDVACRAVSI
MLGRTLNEVKLMLRVGGVESPSDEEDSLEDVLELEVDVDENEEDDVEIEIPAISAA
NT seq 531 nt   +upstreamnt  +downstreamnt
atggtgatcggtcagatcaagccagttttcaaaattcaatcatgcgacggtcaggttttt
gccgttgaagactggtttatccaaaagtccaagtgcttttctgttgtgttggctcaaatg
aacaatctcgtacaaccgcatcctctcaaaaccagcatctgtagctttgtgctcgtgaag
attatcgaatggtgttaccatcatcgcaatgaggatcaagatcatgcccagcgaattctc
accgcctgggatgttcaatttatccgcaccaatagtgcgattctgctccatttggctgaa
gcggcttttcgtctggaaattgtaggactattggacgtggcctgcagagctgtgtccatt
atgctcggaagaactctaaatgaagtcaagcttatgctacgagttggaggagttgagagc
ccatcggacgaggaagacagtctggaagatgtcctagaattggaagtagatgtggatgaa
aatgaagaagacgatgttgaaattgaaatcccagccatatcagctgcatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system