KEGG T00019: CELE

Caenorhabditis elegans (nematode): CELE_T19B10.3

Entry

CELE_T19B10.3 CDS T00019

Gene name

T19B10.3

Definition

Protein T19B10.3

Orthology

K12309

beta-galactosidase [EC:3.2.1.23]

Organism

cel Caenorhabditis elegans (nematode)

Pathway

cel00052	Galactose metabolism
cel00511	Other glycan degradation
cel00531	Glycosaminoglycan degradation
cel00600	Sphingolipid metabolism
cel00604	Glycosphingolipid biosynthesis - ganglio series
cel01100	Metabolic pathways
cel04142	Lysosome

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:cel00052]
Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:cel00600]
Metabolism; Glycan biosynthesis and metabolism; Glycosaminoglycan degradation [PATH:cel00531]
Metabolism; Glycan biosynthesis and metabolism; Glycosphingolipid biosynthesis - ganglio series [PATH:cel00604]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:cel00511]
Cellular Processes; Transport and catabolism; Lysosome [PATH:cel04142]

SSDB

Motif

Pfam:

Glyco_hydro_35 Glyco_hydro_42 BetaGal_dom4_5

Other DBs

NCBI-GI:

NCBI-GeneID:

WormBase:

UniProt:

Position

V:complement(join(11222958..11223383,11223435..11223653,11223796..11223955,11224000..11224465,11224508..11224707,11224751..11224841,11224890..11224975,11225031..11225234,11225884..11225993))

AA seq 653 aa
MELWKSCIFLFLNFCIQSEGIVRTSYGNWNIPKIGDRNIPSFLIDESKNQFLLDGLPFRY
ISGSIHYFRIPRDRWDERLGKVRALGFNAIQYYIPWNMHELEEGNHDFSGLLDFAEFSMM
AFHKYGLWTILRVGPYICGELENGGLPWWLLNKNVTKQRSSDRVFTREVENWFEILLPRV
KPLLRKNGGPVLMLQIENEYGSYDACDQQYLRFLRDLTRSLVGDDVLLFTTDGSAESLLK
CGTVEGVFPTVDFGPTDDAKEIENNFKLQRKFAPNGPLVNSEYYPGWLVLWGQKKQNLPS
PQTIINGSQTMYSLGASFNYYMIHGGTNFGFWNGAETEAPCITSYDYDAPISESGDVTTK
YLEIRKWIKGLTDWPTPPLDVPGNSPKGRFGKIKMRLVHSVEKLKTLTSLGDPGDCVETD
KPISFETLKHPLGLVAYQAKINSCGNLTIPSFGDFVHVYLNGKYIDTLTRRYYNLTRNSV
IIEGCLENEENRLFMLVENQGRKTFETINDRKGILSDVFMNGQAIQFWTQCGIKLPLQED
FYFRKAMRNNYRKNVKSNQKQGVFIGILSVDAPTDTWLDTTGWGKGIAIVNGRNFGRYWP
TKGPQMTLYIPAEFLKIGENSVMMVELEGAEEACTSTSSCIADFIDHPVFDFQ

NT seq 1962 nt +upstreamnt +downstreamnt
atggaattatggaaaagctgtatatttctgtttttaaatttttgcattcaatctgaaggt
atcgtcagaacaagttacggcaattggaatattccaaaaattggtgatagaaatatacct
tcatttcttattgacgaatcaaagaaccaatttctactcgatggtcttccatttcgttac
atctctggatccattcattatttccgaattcctcgtgatcggtgggacgaacgtctcggg
aaagttcgagctcttggatttaatgcaattcagtattatattccatggaatatgcacgag
cttgaagaaggaaatcatgacttttctggacttctcgatttcgcagagttttccatgatg
gcttttcataaatatggattatggacaattttgagagtcggaccgtatatttgtggagaa
ttggaaaatggagggcttccatggtggcttctcaacaaaaatgtgacaaagcaaagaagt
agtgatcgagtgtttacccgcgaagtcgagaattggtttgaaattcttcttccaagagtc
aagccacttttacgtaaaaacggtggacctgtcctgatgcttcaaattgaaaatgagtac
ggtagttacgatgcatgcgatcaacaatatcttcgattcttgcgagatcttacaagatca
ctcgttggggatgatgttctattattcacaactgatggttctgccgagtctctgctaaaa
tgtggaacagtggaaggagtatttccaactgtagactttggtccaactgatgatgctaaa
gaaatcgaaaacaattttaaattacaaagaaaatttgcaccgaatggccctctagtaaat
tcggaatattatcctggatggttggtactttggggacaaaagaagcaaaatttaccgtct
ccacaaacaataatcaatggatcacaaactatgtattctcttggtgccagtttcaattat
tatatgattcacggaggcaccaattttggattttggaatggtgcagaaactgaggctcct
tgcattacttcttacgattatgatgctccgattagtgaatctggagatgtaacaaccaaa
tatttggaaataagaaaatggatcaaaggattgactgattggccaactccaccattggat
gttccaggaaattcaccaaaaggaagatttggaaaaatcaagatgagactagtgcattcc
gttgaaaaattgaaaacactaacttcattgggagatcccggagattgtgttgaaactgat
aaaccaatcagttttgagacattgaagcatccattaggattggtagcttatcaggcaaaa
attaactcatgtggaaacttgacaattccctcatttggagattttgttcatgtttatctc
aatggaaagtacattgacactctcacgcgaagatattacaacctgaccagaaactcagtg
atcattgaaggttgcctggagaatgaagagaatcggctttttatgttggtcgaaaatcaa
ggaagaaaaacattcgaaacaattaatgatagaaagggaattctttcggatgtttttatg
aatggacaggcgattcaattttggactcaatgtggaatcaagcttcctcttcaagaagac
ttctacttcagaaaagcaatgagaaacaattaccggaagaatgttaaaagtaatcaaaaa
cagggagttttcattggaattcttagtgtggatgccccaactgatacatggcttgacact
actggatggggaaaaggaattgcaattgtgaatggaagaaattttggaagatattggcca
actaaaggtccacaaatgactttgtacattccagcagaattcttgaaaattggagaaaat
tcagtgatgatggttgagctagaaggagctgaggaagcttgtacaagtacatcatcgtgc
attgctgactttattgatcatcctgtttttgattttcaatga

All links

Pathway (7)   
   KEGG PATHWAY (7)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (34)   

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