KEGG   Caenorhabditis elegans (nematode): CELE_T21C9.2
Entry
CELE_T21C9.2      CDS       T00019                                 
Symbol
vps-54
Name
(RefSeq) Vacuolar protein sorting-associated protein 54
  KO
K17600  vacuolar protein sorting-associated protein 54
Organism
cel  Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:cel00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cel01009]
    CELE_T21C9.2 (vps-54)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cel04131]
    CELE_T21C9.2 (vps-54)
Protein phosphatases and associated proteins [BR:cel01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     CELE_T21C9.2 (vps-54)
Membrane trafficking [BR:cel04131]
 Endosome - Golgi transport
  Tethering complex
   GARP complex
    CELE_T21C9.2 (vps-54)
SSDB
Motif
Pfam: Vps54 Vps54_N Sec8_N FA_desaturase_2
Other DBs
NCBI-GeneID: 179473
NCBI-ProteinID: NP_001256226
WormBase: WBGene00006934
Ensembl: WBGene00006934
UniProt: Q22639
Position
V:complement(<10566402..>10576419)
AA seq 1058 aa
MKSMDDRTVGLISASSSRASLKIQPEIGYPRICDYCQPIIELMTASEFARHIRQDHTTKE
GGSFLCRYGEHGVCQKLPLEGVCDLDFEAHIRRCHTSSQPAGYSSPTSSLVASYTEDSEE
TASLRSIRLTSDRDTPTIEKKKFTLHSFTQNLSAVLADPSRSRSDLTTFFTRHWGDSFVP
TQPVPQSKRLARLADSAFDSYCQSAGESYRRYQAIKRALRLSHADGGVGIGDERQDAEDL
PTIFIDPRFTLGDSSTFSDVFTVPANDDLDALKQTLSGRNVIPATPLEIATNRKPGEFRD
YEALQNRLEMMHDVVDGRLAGKLVAKTDDFWQVVRSYSGLQEQLANALQCVMVVRKNLKR
VDELVCDQSKKIVEVHERYEQKKKLLAKLHDISCLREAQSTVQMMLSQGDYPKAIECIET
SLDVLSKELNGVTCFRHLASQLRELYTVIGRMMNEDFASLIQKELGVKPEAGTMIQAEGE
LSAVLLGLMRMRKYSFIAVLREEIIEGVKSVMRQVIKNQILNNGVDLNDFDPSLTQLGEP
VRRMKHADFLKTVKAVMDEEFYFCKRLEALQDILLETVERANPLHRHGSEDIIVERIEEA
KDIHESESDDEVGTTFSKSASSGGFSVGGSALSSNASATTLLSIEVRSEAFLRHVLPLIA
EFGHQCAQQRISRLLIARAKNASVTEATTPTQLSECIKLVKEFQSKCDKEGWYSTQNQKV
GGLGRSVNKLSMDYIEKFHAARKIRIGNMLDTELWKATDVSIVDQNIVDMAMETGQLRNT
KRIDDGPIKKSFKRTESAVTIDSTTSTSNQIQGVIVDEENYVVVGSSITMIQLLSDYCEA
ISEMPSFSQDWNSRVVELLKTFNSRCCQLILGAGALQLVGLKTISVRNLALAGRSLELVC
RFIPMVHDEMDRVLPENRKSLLRYFKQVESEYRDHVNEIAAKLISVIAHYTTNCLGMWDV
KGVIPSPEFQQICRHMLKFHNGLVGIMPRDQIEALFRQVHENFKANLREHVTGMGITPHD
PLKYGYVTKDYMFYQQNVKNMESCRNLELESLNDIMFE
NT seq 3177 nt   +upstreamnt  +downstreamnt
atgaaatcaatggatgaccgaacagtaggtcttatatctgcaagttcatcaagagcttca
ctcaaaattcaaccggagattggttatccaagaatatgtgattattgtcagccaattatc
gagcttatgacggcttccgagtttgcacgacatattcgacaagatcatacgacaaaagaa
ggtggtagctttctttgtagatacggagaacatggagtatgtcagaaactaccactggaa
ggagtatgtgatcttgattttgaagcccacattcgtcgttgtcacacttcttctcaacca
gctggatattcaagtccaacatcttcattggtagcaagttatactgaagatagtgaagaa
acagctagtttgagaagtatacgattgacaagtgatcgagatactccaacaattgaaaag
aaaaaattcactcttcacagtttcactcaaaatctgtcagcagttcttgccgatccatca
cgatctcgaagtgacctaacaacgttcttcacacgccattggggtgacagttttgttcca
acacaaccggtaccacaatctaaaagactcgctcggctcgctgattcggctttcgatagt
tattgtcaatctgctggagagtcctatcgtcgatatcaggcaatcaaaagagctctacgt
ttgagtcacgccgatggaggagttggaattggagatgaaagacaagatgcggaagatctg
cctacgatattcatcgacccccgatttacacttggcgacagttctactttttcggatgtg
ttcacagttcctgccaatgatgatttggatgcattgaaacaaactttatcaggtagaaat
gtgattccagctacacctttagaaattgctaccaacaggaaacctggagaatttcgagac
tacgaagctcttcaaaacagattggaaatgatgcatgacgttgtggatggaagattggct
ggaaaattagttgcaaaaactgatgatttttggcaagtcgtccgatcgtacagtggcctc
caggaacaacttgccaacgcgttgcaatgtgtgatggttgttcgaaaaaacttgaaaaga
gtcgacgaactagtatgcgaccagtcaaaaaagattgtagaagttcatgaaagatacgaa
caaaaaaagaaactgctggcaaaacttcatgatatttcatgtctccgagaagcccaatca
acagttcaaatgatgttatcacaaggagattacccaaaggctatagaatgcattgaaacg
agtctagatgttctctcaaaggaattgaacggcgtcacttgtttccgacatcttgcatca
cagcttcgagagctttatacagtaattggacgtatgatgaatgaagattttgcatcatta
atacaaaaagagctcggtgtgaagccagaagctggaacgatgattcaagccgaaggagaa
ctttctgctgtcctacttggattgatgagaatgcgaaagtactcatttattgcagtttta
agagaggaaattattgaaggagtcaaaagtgtaatgcgacaagttattaaaaatcaaatt
ctaaataatggagttgatttgaacgattttgatcctagtttgacacagttgggagagcca
gtacgaagaatgaaacatgctgattttttgaaaactgtgaaagctgttatggatgaagag
ttctacttttgtaaacgattggaagctctacaagatattctactggaaactgttgaacga
gcaaatcctctacatcgacatggctctgaagatattatagttgagagaatcgaagaagca
aaagatattcacgaatctgagtctgacgatgaagttggtacaactttttccaaatcagct
agttcaggaggattctccgtcggtggttcggctttatcctctaacgcgtcagctaccact
cttctttcgattgaagtcagatcagaagcctttttacgacacgtgctcccattgatcgca
gaattcggtcatcaatgtgcgcaacaacggatttcacgattgctcattgctcgggccaaa
aatgcatcagtgacagaagctactacacctacccaactatctgaatgcattaaactcgtt
aaagaatttcaatccaagtgtgacaaggaaggatggtattccactcagaatcaaaaagtt
ggaggtcttggaagatctgttaacaagctttctatggattacattgaaaaattccatgca
gctcgaaagattcgtattggaaatatgcttgacacagaactttggaaagcgactgatgtt
tcgattgtggatcagaacattgtcgacatggcgatggaaacgggccaattaagaaacaca
aagcgaatagatgatggtccaataaaaaaatcattcaaaagaacagaaagcgctgtgaca
attgattcaacaacatctacttcaaatcaaattcaaggtgtaattgttgatgaagagaac
tatgttgttgttggatcatcaataacaatgatccagctcctttctgactactgtgaagcc
atatctgaaatgccatcattttcccaagactggaattcgcgagttgtggaattactgaaa
acatttaacagtcggtgttgtcaattgattttaggtgcaggtgccctacaattggttgga
ttaaagactatatctgttcgaaatttagcactcgcaggtcgatcactcgagttagtatgc
cgcttcattccgatggttcatgatgagatggacagagttcttcctgaaaatcgaaaaagt
ctgcttcggtacttcaagcaggttgaaagtgaataccgcgatcacgtcaacgaaattgct
gccaaattaataagtgtaatagctcattatacaacaaattgtcttggaatgtgggatgtg
aaaggagtgattccatcgccagaatttcaacaaatttgtcgccatatgctgaaattccac
aatggactggttggcatcatgccaagagatcagatcgaggcgttgttccgtcaagtacac
gaaaactttaaagccaacttacgagaacacgtcactggaatgggtatcacacctcatgac
cctttaaaatacggatatgtcacaaaagattacatgttttatcaacaaaatgtgaaaaac
atggaaagttgccgtaatttggagctcgagtcgcttaatgacattatgtttgaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (45)   

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