KEGG   Caenorhabditis elegans (nematode): CELE_Y48C3A.20
Entry
CELE_Y48C3A.20    CDS       T00019                                 
Symbol
Y48C3A.20
Name
(RefSeq) tRNA pseudouridine(55) synthase
  KO
K07583  tRNA pseudouridine synthase 10 [EC:5.4.99.25]
Organism
cel  Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:cel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cel03016]
    CELE_Y48C3A.20 (Y48C3A.20)
Enzymes [BR:cel01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     CELE_Y48C3A.20 (Y48C3A.20)
Transfer RNA biogenesis [BR:cel03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    CELE_Y48C3A.20 (Y48C3A.20)
SSDB
Motif
Pfam: Pus10_C Pus10_N_euk
Other DBs
NCBI-GeneID: 174977
NCBI-ProteinID: NP_001364616
WormBase: WBGene00012998
Ensembl: WBGene00012998
Position
II:<13369607..13376296
AA seq 469 aa
MSNDKTPLVLCEVCVRQISGDAEEVTKCENSFECQLCFGIMDQAMIDEVGEKVQEELSKL
PYDSMSFILALNLPVGQTLREILVSRLRPDFNGTLASVPYKVRNIDGYLKKLGSYSGKRP
TLSSDLQLMITFEQEESNFSDLQFLQNQFPNDFRVGKRGRYNNNQEAPSSVSKQQLQQVT
GRINEQIAKKYIFKSPTRKCTFQLQFERDPVYIAGRYCKYSRCLPQSPWSEDKDAPREPG
NSVSEKVCDLLKKQFGASDSRFVTSGREDIDVRMLGTGRPFVVELRNCRTTAPVRGIKYL
ETLKTVQEAINVQKDVKVVSLTRVPRDVSEKLCVGEEDKRKQYCAYCYSILPISDSQFTA
AQSKIPLKIVQKTPVRVMKRRALLDRERWIYSMNFLKLDDHHFEVRLETQAGTYIKEFVH
GDFGRTRPSLAELLDVEHGEVDILELDVEKVDLEWPPELKDGQEPVKFR
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgtcaaatgacaaaactccgctagttttgtgcgaagtttgcgtgcgacaaatctctgga
gacgcggaggaagtgacaaaatgcgaaaattctttcgaatgtcagctttgcttcgggatt
atggatcaggcaatgattgatgaggtcggcgaaaaagtgcaagaagagctctccaagctg
ccctacgactcgatgagcttcattttggcgttgaatttgcccgttggacagactttaagg
gagattctagtaagccgtctccgaccggatttcaatgggacactggcttctgttccgtat
aaagtgcgaaatattgatggatatttgaagaaattgggctcttattccggaaaacgacca
actctgagctcagatctccagcttatgatcacttttgagcaggaggaatcgaatttttcg
gatctacaatttcttcaaaatcaatttccgaacgattttcgtgttggaaaacgtggaaga
tataataataatcaagaagcgccgtcgagtgtatcaaaacagcaattacagcaggtcact
ggcaggattaacgagcaaattgcaaaaaagtacatcttcaaatcgccaacccgtaaatgc
acatttcaacttcaattcgaacgagatccagtatacattgctggaagatattgtaaatat
tcaagatgtctaccacaatcaccgtggagtgaggataaagatgctccgagagagcccgga
aattcggtttccgaaaaagtgtgtgacctcctgaaaaagcaattcggagccagtgatagt
cgattcgtgacgtcaggacgtgaggatattgacgtcagaatgctcggaaccggccgccca
tttgtcgttgagctccgaaattgtagaacgacggctccagtgagaggaatcaagtatttg
gagacactgaagacggttcaggaggctataaatgtacagaaggatgtgaaagtcgtgtcg
ctgaccagagttccacgggatgtttctgagaagctgtgtgttggagaagaagacaaacga
aagcaatattgtgcctactgctacagtattctcccaatttctgactcccaattcaccgct
gctcaatcgaaaatcccgctgaaaattgttcaaaagacgccagttcgtgtgatgaagcgt
cgagctctactcgacagagaacgatggatttattcgatgaatttcttaaaattggacgat
caccactttgaagttcgtctcgagacccaagcaggaacatatatcaaggaatttgttcac
ggagattttggaaggacgaggccttcgcttgccgagctccttgacgttgagcacggagaa
gttgatattttggagctggatgtggagaaagttgatttggaatggccaccggagcttaag
gatggacaggagcccgttaaatttcgatag

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