KEGG   Caenorhabditis elegans (nematode): CELE_Y73F8A.24Help
Entry
CELE_Y73F8A.24    CDS       T00019                                 

Gene name
Y73F8A.24
Definition
Protein Y73F8A.24, isoform B
Orthology
K03144  
transcription initiation factor TFIIH subunit 4
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
Basal transcription factors
Nucleotide excision repair
Module
Holo-TFIIH complex
Brite
KEGG Orthology (KO) [BR:cel00001]
 Genetic Information Processing
  Transcription
   03022 Basal transcription factors
    CELE_Y73F8A.24 (Y73F8A.24)
  Replication and repair
   03420 Nucleotide excision repair
    CELE_Y73F8A.24 (Y73F8A.24)
Transcription machinery [BR:cel03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     CELE_Y73F8A.24 (Y73F8A.24)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
WormBase: 
UniProt: 
Position
IV:complement(join(15445472..15445741,15446550..15446706,15447146..15447340,15449094..15449196,15449267..15449526,15451079..15451221,15452390..15452498,15452560..15452618))
Genome map
AA seq 431 aa AA seqDB search
MLPPIAQQTTIQLIWKGSFPTASDVEETKEIEDQVKLLKDLGLVHRQTTDGKLNIDTDYK
RSYMYAAMLGAAQISSLVLEPNEGNRRGKDVEKKAVERWDCILRYLALPSEENTQAVSET
TRNLFKKANFTSGGDTQIEITTFGFQFLLLSPVKQMWTYVIEYLKLEMSQGQDIVEVIEP
LIQIVLLANRGFKAERECYQIDANWTEPQNELLNHLRELGVIFIRKRKDGVFFLTQLLTH
LATNETIDDVSAEKVSNGKVIVETNFRVYAYTSSLLQLAIIALFTEMTYRFQDMSVGMIT
RESVRGALQHGITAAQIISFLRANAHPQCIATSGPVNCLPITVADQIRLWEDERRRMNLK
DAYIYSHFESEDEFHGVCEYARQQNILLWSDNQQKLVIVNEDGHELVRQWYKREKSKTGA
GGEASSSTSSA
NT seq 1296 nt NT seq  +upstreamnt  +downstreamnt
atgcttcctccaattgcccaacaaaccacaattcaattgatttggaaaggaagttttcca
acagcttcagacgttgaggagacgaaagaaattgaggatcaagtgaaacttttgaaagat
ttaggtttagtacatcgtcagacgacggatgggaagcttaatattgatacagactacaag
cgatcctacatgtatgcggcaatgctcggcgccgcgcaaatttcgagtttagttttggaa
ccgaatgagggaaatcgtagaggaaaagatgttgaaaagaaggctgtggagagatgggat
tgtattttaagatacctagctcttccatccgaagaaaacactcaagccgtctccgaaacc
accagaaatttattcaaaaaagccaatttcacaagtggtggtgatacacaaatcgaaatc
accacttttggttttcaatttctccttttaagccctgtcaaacaaatgtggacatatgtt
atcgaatatttaaaactagaaatgagccaaggacaggatattgtcgaagttattgagcca
ttgatacaaattgtgctcttggcgaatagaggattcaaagccgaacgggaatgttatcaa
atcgatgcgaactggacggagccacagaatgagctgctcaatcatttgagagagctcggc
gttatttttattagaaaacgaaaagacggagtattctttctaactcaactgctcacccat
ctggccaccaacgaaacaatcgatgacgtgtcagcggagaaggtctcgaacggaaaagtt
attgtggagacaaatttccgagtgtacgcgtacacttcgtcactgctacaactcgcgatt
atcgccctgttcactgaaatgacttatagattccaagacatgtctgtcggaatgattaca
cgtgaatccgtacgaggagccctgcaacacggaatcaccgccgctcagatcatctcgttc
ctccgtgccaacgcccacccacaatgcatcgccacgtcggggcctgtgaattgtctgccg
attacggtagccgatcaaattcgcctgtgggaagacgaacgtcgtcgtatgaacctgaaa
gacgcctacatttactctcatttcgagtcggaagacgaatttcatggtgtctgtgagtat
gctcgacagcagaacatcctcctgtggtctgataatcagcagaagcttgtgattgttaat
gaggatggacatgagctcgtcaggcagtggtacaaacgcgagaagagcaagactggagca
ggaggagaagccagcagcagcacatcgagcgcctga

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